Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
RC3H1Q5TC82 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
RC3H1Q5TC82 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC25.47■■□□□ 1.67
RC3H1Q5TC82 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
RC3H1Q5TC82 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC25.47■■□□□ 1.67
RC3H1Q5TC82 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC25.47■■□□□ 1.67
RC3H1Q5TC82 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC25.47■■□□□ 1.67
RC3H1Q5TC82 PPP1R14BP5-201ENST00000440334 435 ntBASIC25.47■■□□□ 1.67
RC3H1Q5TC82 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC25.47■■□□□ 1.67
RC3H1Q5TC82 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC25.47■■□□□ 1.67
RC3H1Q5TC82 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC25.47■■□□□ 1.67
RC3H1Q5TC82 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC25.47■■□□□ 1.67
RC3H1Q5TC82 AC010203.1-204ENST00000548782 407 ntBASIC25.47■■□□□ 1.67
RC3H1Q5TC82 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC25.47■■□□□ 1.67
RC3H1Q5TC82 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC25.47■■□□□ 1.67
RC3H1Q5TC82 FSCN1P1-201ENST00000568912 1481 ntBASIC25.47■■□□□ 1.67
RC3H1Q5TC82 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC25.47■■□□□ 1.67
RC3H1Q5TC82 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
RC3H1Q5TC82 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC25.46■■□□□ 1.67
RC3H1Q5TC82 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC25.46■■□□□ 1.67
RC3H1Q5TC82 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC25.46■■□□□ 1.67
RC3H1Q5TC82 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC25.46■■□□□ 1.67
RC3H1Q5TC82 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
RC3H1Q5TC82 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
RC3H1Q5TC82 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC25.46■■□□□ 1.67
RC3H1Q5TC82 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
RC3H1Q5TC82 AC026271.3-201ENST00000571884 352 ntBASIC25.46■■□□□ 1.67
RC3H1Q5TC82 AP005242.2-201ENST00000580065 1175 ntBASIC25.46■■□□□ 1.67
RC3H1Q5TC82 CLN6-221ENST00000637494 765 ntTSL 5 BASIC25.46■■□□□ 1.67
RC3H1Q5TC82 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC25.46■■□□□ 1.67
RC3H1Q5TC82 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC25.46■■□□□ 1.67
RC3H1Q5TC82 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
RC3H1Q5TC82 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC25.46■■□□□ 1.67
RC3H1Q5TC82 ECEL1P1-201ENST00000373592 1742 ntBASIC25.46■■□□□ 1.67
RC3H1Q5TC82 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC25.45■■□□□ 1.67
RC3H1Q5TC82 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC25.45■■□□□ 1.66
RC3H1Q5TC82 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC25.45■■□□□ 1.66
RC3H1Q5TC82 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC25.45■■□□□ 1.66
RC3H1Q5TC82 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC25.45■■□□□ 1.66
RC3H1Q5TC82 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC25.45■■□□□ 1.66
RC3H1Q5TC82 GRAMD4P8-201ENST00000605465 1115 ntBASIC25.45■■□□□ 1.66
RC3H1Q5TC82 AL445675.2-201ENST00000620291 557 ntBASIC25.45■■□□□ 1.66
RC3H1Q5TC82 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC25.45■■□□□ 1.66
RC3H1Q5TC82 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC25.45■■□□□ 1.66
RC3H1Q5TC82 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
RC3H1Q5TC82 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC25.44■■□□□ 1.66
RC3H1Q5TC82 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
RC3H1Q5TC82 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC25.44■■□□□ 1.66
RC3H1Q5TC82 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
RC3H1Q5TC82 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
RC3H1Q5TC82 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC25.44■■□□□ 1.66
RC3H1Q5TC82 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC25.44■■□□□ 1.66
RC3H1Q5TC82 C1QL1P1-201ENST00000568105 661 ntBASIC25.44■■□□□ 1.66
RC3H1Q5TC82 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC25.44■■□□□ 1.66
RC3H1Q5TC82 AC244015.2-201ENST00000616358 1861 ntBASIC25.44■■□□□ 1.66
RC3H1Q5TC82 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
RC3H1Q5TC82 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC25.44■■□□□ 1.66
RC3H1Q5TC82 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
RC3H1Q5TC82 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC25.44■■□□□ 1.66
RC3H1Q5TC82 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC25.44■■□□□ 1.66
RC3H1Q5TC82 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC25.44■■□□□ 1.66
RC3H1Q5TC82 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC25.44■■□□□ 1.66
RC3H1Q5TC82 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC25.43■■□□□ 1.66
RC3H1Q5TC82 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC25.43■■□□□ 1.66
RC3H1Q5TC82 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC25.43■■□□□ 1.66
RC3H1Q5TC82 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC25.43■■□□□ 1.66
RC3H1Q5TC82 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
RC3H1Q5TC82 TSPY14P-201ENST00000303979 915 ntBASIC25.43■■□□□ 1.66
RC3H1Q5TC82 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC25.43■■□□□ 1.66
RC3H1Q5TC82 CALM3-202ENST00000391918 702 ntTSL 2 BASIC25.43■■□□□ 1.66
RC3H1Q5TC82 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC25.43■■□□□ 1.66
RC3H1Q5TC82 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC25.43■■□□□ 1.66
RC3H1Q5TC82 EGLN1P1-201ENST00000531623 762 ntBASIC25.43■■□□□ 1.66
RC3H1Q5TC82 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC25.43■■□□□ 1.66
RC3H1Q5TC82 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
RC3H1Q5TC82 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC25.43■■□□□ 1.66
RC3H1Q5TC82 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
RC3H1Q5TC82 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
RC3H1Q5TC82 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
RC3H1Q5TC82 LGALS8-AS1-201ENST00000487567 1457 ntBASIC25.42■■□□□ 1.66
RC3H1Q5TC82 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
RC3H1Q5TC82 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
RC3H1Q5TC82 C2orf69P3-201ENST00000565542 1120 ntBASIC25.42■■□□□ 1.66
RC3H1Q5TC82 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC25.42■■□□□ 1.66
RC3H1Q5TC82 AC006011.2-201ENST00000621313 1158 ntBASIC25.42■■□□□ 1.66
RC3H1Q5TC82 ABBA01031674.1-201ENST00000635145 728 ntBASIC25.42■■□□□ 1.66
RC3H1Q5TC82 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC25.42■■□□□ 1.66
RC3H1Q5TC82 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC25.42■■□□□ 1.66
RC3H1Q5TC82 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC25.42■■□□□ 1.66
RC3H1Q5TC82 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
RC3H1Q5TC82 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
RC3H1Q5TC82 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC25.41■■□□□ 1.66
RC3H1Q5TC82 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
RC3H1Q5TC82 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC25.41■■□□□ 1.66
RC3H1Q5TC82 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC25.41■■□□□ 1.66
RC3H1Q5TC82 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC25.41■■□□□ 1.66
RC3H1Q5TC82 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
RC3H1Q5TC82 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
RC3H1Q5TC82 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC25.41■■□□□ 1.66
RC3H1Q5TC82 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC25.41■■□□□ 1.66
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms