Protein–RNA interactions for Protein: Q5T3J3

LRIF1, Ligand-dependent nuclear receptor-interacting factor 1, humanhuman

Predictions only

Length 769 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRIF1Q5T3J3 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
LRIF1Q5T3J3 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC18.92■□□□□ 0.62
LRIF1Q5T3J3 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC18.92■□□□□ 0.62
LRIF1Q5T3J3 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC18.92■□□□□ 0.62
LRIF1Q5T3J3 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC18.92■□□□□ 0.62
LRIF1Q5T3J3 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC18.92■□□□□ 0.62
LRIF1Q5T3J3 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC18.92■□□□□ 0.62
LRIF1Q5T3J3 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
LRIF1Q5T3J3 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
LRIF1Q5T3J3 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
LRIF1Q5T3J3 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
LRIF1Q5T3J3 PTBP1P-201ENST00000554374 1601 ntBASIC18.92■□□□□ 0.62
LRIF1Q5T3J3 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
LRIF1Q5T3J3 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC18.91■□□□□ 0.62
LRIF1Q5T3J3 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
LRIF1Q5T3J3 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC18.91■□□□□ 0.62
LRIF1Q5T3J3 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC18.91■□□□□ 0.62
LRIF1Q5T3J3 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
LRIF1Q5T3J3 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
LRIF1Q5T3J3 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
LRIF1Q5T3J3 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
LRIF1Q5T3J3 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
LRIF1Q5T3J3 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
LRIF1Q5T3J3 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
LRIF1Q5T3J3 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
LRIF1Q5T3J3 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
LRIF1Q5T3J3 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
LRIF1Q5T3J3 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC18.91■□□□□ 0.62
LRIF1Q5T3J3 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
LRIF1Q5T3J3 AL591742.1-201ENST00000604433 565 ntBASIC18.91■□□□□ 0.62
LRIF1Q5T3J3 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC18.91■□□□□ 0.62
LRIF1Q5T3J3 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
LRIF1Q5T3J3 GOLGA2P11-201ENST00000562660 1621 ntBASIC18.91■□□□□ 0.62
LRIF1Q5T3J3 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
LRIF1Q5T3J3 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
LRIF1Q5T3J3 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC18.91■□□□□ 0.62
LRIF1Q5T3J3 AC093484.2-201ENST00000580996 2166 ntBASIC18.91■□□□□ 0.62
LRIF1Q5T3J3 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
LRIF1Q5T3J3 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
LRIF1Q5T3J3 STK25-205ENST00000405883 1904 ntTSL 2 BASIC18.9■□□□□ 0.62
LRIF1Q5T3J3 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
LRIF1Q5T3J3 AC009237.14-201ENST00000609975 1594 ntBASIC18.9■□□□□ 0.62
LRIF1Q5T3J3 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
LRIF1Q5T3J3 PARP1-202ENST00000366792 553 ntTSL 3 BASIC18.9■□□□□ 0.62
LRIF1Q5T3J3 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
LRIF1Q5T3J3 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC18.9■□□□□ 0.62
LRIF1Q5T3J3 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
LRIF1Q5T3J3 UQCRFS1P1-201ENST00000435169 820 ntBASIC18.9■□□□□ 0.62
LRIF1Q5T3J3 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC18.9■□□□□ 0.62
LRIF1Q5T3J3 AL162412.1-201ENST00000567129 965 ntBASIC18.9■□□□□ 0.62
LRIF1Q5T3J3 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC18.9■□□□□ 0.62
LRIF1Q5T3J3 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC18.9■□□□□ 0.62
LRIF1Q5T3J3 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
LRIF1Q5T3J3 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC18.9■□□□□ 0.62
LRIF1Q5T3J3 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
LRIF1Q5T3J3 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
LRIF1Q5T3J3 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC18.9■□□□□ 0.62
LRIF1Q5T3J3 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
LRIF1Q5T3J3 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
LRIF1Q5T3J3 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
LRIF1Q5T3J3 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC18.9■□□□□ 0.62
LRIF1Q5T3J3 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
LRIF1Q5T3J3 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC18.9■□□□□ 0.62
LRIF1Q5T3J3 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.62
LRIF1Q5T3J3 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
LRIF1Q5T3J3 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
LRIF1Q5T3J3 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC18.89■□□□□ 0.62
LRIF1Q5T3J3 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
LRIF1Q5T3J3 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
LRIF1Q5T3J3 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
LRIF1Q5T3J3 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
LRIF1Q5T3J3 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC18.89■□□□□ 0.61
LRIF1Q5T3J3 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC18.89■□□□□ 0.61
LRIF1Q5T3J3 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC18.89■□□□□ 0.61
LRIF1Q5T3J3 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
LRIF1Q5T3J3 TERF1P5-201ENST00000477545 1207 ntBASIC18.89■□□□□ 0.61
LRIF1Q5T3J3 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
LRIF1Q5T3J3 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC18.89■□□□□ 0.61
LRIF1Q5T3J3 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
LRIF1Q5T3J3 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
LRIF1Q5T3J3 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
LRIF1Q5T3J3 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
LRIF1Q5T3J3 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC18.88■□□□□ 0.61
LRIF1Q5T3J3 AC098818.2-201ENST00000564925 2320 ntBASIC18.88■□□□□ 0.61
LRIF1Q5T3J3 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
LRIF1Q5T3J3 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
LRIF1Q5T3J3 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
LRIF1Q5T3J3 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
LRIF1Q5T3J3 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC18.88■□□□□ 0.61
LRIF1Q5T3J3 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
LRIF1Q5T3J3 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC18.88■□□□□ 0.61
LRIF1Q5T3J3 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC18.88■□□□□ 0.61
LRIF1Q5T3J3 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
LRIF1Q5T3J3 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
LRIF1Q5T3J3 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
LRIF1Q5T3J3 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
LRIF1Q5T3J3 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
LRIF1Q5T3J3 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
LRIF1Q5T3J3 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
LRIF1Q5T3J3 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms