Protein–RNA interactions for Protein: Q5S007

LRRK2, Leucine-rich repeat serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 2,527 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK2Q5S007 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
LRRK2Q5S007 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
LRRK2Q5S007 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC17.57■□□□□ 0.4
LRRK2Q5S007 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
LRRK2Q5S007 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
LRRK2Q5S007 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC17.57■□□□□ 0.4
LRRK2Q5S007 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
LRRK2Q5S007 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
LRRK2Q5S007 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC17.57■□□□□ 0.4
LRRK2Q5S007 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC17.57■□□□□ 0.4
LRRK2Q5S007 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
LRRK2Q5S007 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
LRRK2Q5S007 DAP-202ENST00000432074 1048 ntTSL 2 BASIC17.57■□□□□ 0.4
LRRK2Q5S007 TSPY21P-201ENST00000433481 731 ntBASIC17.57■□□□□ 0.4
LRRK2Q5S007 TSPY23P-201ENST00000440136 739 ntBASIC17.57■□□□□ 0.4
LRRK2Q5S007 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
LRRK2Q5S007 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
LRRK2Q5S007 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
LRRK2Q5S007 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
LRRK2Q5S007 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
LRRK2Q5S007 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
LRRK2Q5S007 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
LRRK2Q5S007 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
LRRK2Q5S007 AC009078.2-202ENST00000463353 338 ntBASIC17.56■□□□□ 0.4
LRRK2Q5S007 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
LRRK2Q5S007 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
LRRK2Q5S007 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
LRRK2Q5S007 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC17.56■□□□□ 0.4
LRRK2Q5S007 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
LRRK2Q5S007 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
LRRK2Q5S007 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
LRRK2Q5S007 AC023632.3-201ENST00000521633 145 ntBASIC17.56■□□□□ 0.4
LRRK2Q5S007 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC17.56■□□□□ 0.4
LRRK2Q5S007 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
LRRK2Q5S007 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
LRRK2Q5S007 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC17.56■□□□□ 0.4
LRRK2Q5S007 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
LRRK2Q5S007 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC17.56■□□□□ 0.4
LRRK2Q5S007 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC17.56■□□□□ 0.4
LRRK2Q5S007 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC17.56■□□□□ 0.4
LRRK2Q5S007 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC17.55■□□□□ 0.4
LRRK2Q5S007 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC17.55■□□□□ 0.4
LRRK2Q5S007 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC17.55■□□□□ 0.4
LRRK2Q5S007 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
LRRK2Q5S007 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
LRRK2Q5S007 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
LRRK2Q5S007 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC17.55■□□□□ 0.4
LRRK2Q5S007 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC17.55■□□□□ 0.4
LRRK2Q5S007 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC17.55■□□□□ 0.4
LRRK2Q5S007 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
LRRK2Q5S007 ABBA01031674.1-201ENST00000635145 728 ntBASIC17.55■□□□□ 0.4
LRRK2Q5S007 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
LRRK2Q5S007 GCA-201ENST00000233612 1694 ntTSL 2 BASIC17.55■□□□□ 0.4
LRRK2Q5S007 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC17.55■□□□□ 0.4
LRRK2Q5S007 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
LRRK2Q5S007 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
LRRK2Q5S007 AL359075.1-203ENST00000462729 1002 ntBASIC17.55■□□□□ 0.4
LRRK2Q5S007 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC17.55■□□□□ 0.4
LRRK2Q5S007 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
LRRK2Q5S007 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC17.55■□□□□ 0.4
LRRK2Q5S007 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
LRRK2Q5S007 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC17.54■□□□□ 0.4
LRRK2Q5S007 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC17.54■□□□□ 0.4
LRRK2Q5S007 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
LRRK2Q5S007 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC17.54■□□□□ 0.4
LRRK2Q5S007 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC17.54■□□□□ 0.4
LRRK2Q5S007 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC17.54■□□□□ 0.4
LRRK2Q5S007 HOMER2P1-201ENST00000455653 964 ntBASIC17.54■□□□□ 0.4
LRRK2Q5S007 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
LRRK2Q5S007 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
LRRK2Q5S007 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
LRRK2Q5S007 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
LRRK2Q5S007 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
LRRK2Q5S007 AC007663.1-201ENST00000438948 1240 ntBASIC17.54■□□□□ 0.4
LRRK2Q5S007 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
LRRK2Q5S007 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
LRRK2Q5S007 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC17.54■□□□□ 0.4
LRRK2Q5S007 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC17.54■□□□□ 0.4
LRRK2Q5S007 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
LRRK2Q5S007 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
LRRK2Q5S007 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
LRRK2Q5S007 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC17.53■□□□□ 0.4
LRRK2Q5S007 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC17.53■□□□□ 0.4
LRRK2Q5S007 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC17.53■□□□□ 0.4
LRRK2Q5S007 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
LRRK2Q5S007 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC17.53■□□□□ 0.4
LRRK2Q5S007 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC17.53■□□□□ 0.4
LRRK2Q5S007 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC17.53■□□□□ 0.4
LRRK2Q5S007 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC17.53■□□□□ 0.4
LRRK2Q5S007 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
LRRK2Q5S007 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
LRRK2Q5S007 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC17.53■□□□□ 0.4
LRRK2Q5S007 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC17.53■□□□□ 0.4
LRRK2Q5S007 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
LRRK2Q5S007 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
LRRK2Q5S007 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
LRRK2Q5S007 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
LRRK2Q5S007 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC17.53■□□□□ 0.4
LRRK2Q5S007 FAAHP1-202ENST00000446499 1238 ntBASIC17.53■□□□□ 0.4
LRRK2Q5S007 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC17.53■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms