Protein–RNA interactions for Protein: Q5RKV6

EXOSC6, Exosome complex component MTR3, humanhuman

Known RBP Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC6Q5RKV6 SLC25A24-204ENST00000569674 2357 ntBASIC18.63■□□□□ 0.57
EXOSC6Q5RKV6 AC112907.3-201ENST00000577781 2400 ntBASIC18.63■□□□□ 0.57
EXOSC6Q5RKV6 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
EXOSC6Q5RKV6 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC18.62■□□□□ 0.57
EXOSC6Q5RKV6 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
EXOSC6Q5RKV6 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
EXOSC6Q5RKV6 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC18.62■□□□□ 0.57
EXOSC6Q5RKV6 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
EXOSC6Q5RKV6 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
EXOSC6Q5RKV6 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC18.62■□□□□ 0.57
EXOSC6Q5RKV6 AC083906.2-201ENST00000511578 360 ntBASIC18.62■□□□□ 0.57
EXOSC6Q5RKV6 AL031963.3-201ENST00000606441 850 ntBASIC18.62■□□□□ 0.57
EXOSC6Q5RKV6 NXN-202ENST00000537628 1340 ntTSL 3 BASIC18.62■□□□□ 0.57
EXOSC6Q5RKV6 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
EXOSC6Q5RKV6 KRT8P17-201ENST00000453110 1448 ntBASIC18.62■□□□□ 0.57
EXOSC6Q5RKV6 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC18.62■□□□□ 0.57
EXOSC6Q5RKV6 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
EXOSC6Q5RKV6 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
EXOSC6Q5RKV6 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
EXOSC6Q5RKV6 ME2-218ENST00000640965 2476 ntTSL 5 BASIC18.62■□□□□ 0.57
EXOSC6Q5RKV6 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
EXOSC6Q5RKV6 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
EXOSC6Q5RKV6 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC18.61■□□□□ 0.57
EXOSC6Q5RKV6 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
EXOSC6Q5RKV6 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
EXOSC6Q5RKV6 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
EXOSC6Q5RKV6 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
EXOSC6Q5RKV6 MAP2K4P1-201ENST00000438453 1195 ntBASIC18.61■□□□□ 0.57
EXOSC6Q5RKV6 AC023632.3-201ENST00000521633 145 ntBASIC18.61■□□□□ 0.57
EXOSC6Q5RKV6 PHB2-213ENST00000546111 858 ntTSL 2 BASIC18.61■□□□□ 0.57
EXOSC6Q5RKV6 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
EXOSC6Q5RKV6 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
EXOSC6Q5RKV6 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC18.61■□□□□ 0.57
EXOSC6Q5RKV6 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
EXOSC6Q5RKV6 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
EXOSC6Q5RKV6 AL691432.2-201ENST00000607222 2038 ntBASIC18.61■□□□□ 0.57
EXOSC6Q5RKV6 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC18.61■□□□□ 0.57
EXOSC6Q5RKV6 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
EXOSC6Q5RKV6 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
EXOSC6Q5RKV6 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
EXOSC6Q5RKV6 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
EXOSC6Q5RKV6 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
EXOSC6Q5RKV6 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
EXOSC6Q5RKV6 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC18.6■□□□□ 0.57
EXOSC6Q5RKV6 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC18.6■□□□□ 0.57
EXOSC6Q5RKV6 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
EXOSC6Q5RKV6 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
EXOSC6Q5RKV6 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
EXOSC6Q5RKV6 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
EXOSC6Q5RKV6 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC18.6■□□□□ 0.57
EXOSC6Q5RKV6 MIPEPP3-201ENST00000412105 444 ntBASIC18.6■□□□□ 0.57
EXOSC6Q5RKV6 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC18.6■□□□□ 0.57
EXOSC6Q5RKV6 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC18.6■□□□□ 0.57
EXOSC6Q5RKV6 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
EXOSC6Q5RKV6 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
EXOSC6Q5RKV6 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
EXOSC6Q5RKV6 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC18.6■□□□□ 0.57
EXOSC6Q5RKV6 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
EXOSC6Q5RKV6 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
EXOSC6Q5RKV6 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC18.6■□□□□ 0.57
EXOSC6Q5RKV6 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
EXOSC6Q5RKV6 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
EXOSC6Q5RKV6 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC18.6■□□□□ 0.57
EXOSC6Q5RKV6 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
EXOSC6Q5RKV6 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
EXOSC6Q5RKV6 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
EXOSC6Q5RKV6 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
EXOSC6Q5RKV6 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
EXOSC6Q5RKV6 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
EXOSC6Q5RKV6 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC18.59■□□□□ 0.57
EXOSC6Q5RKV6 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC18.59■□□□□ 0.57
EXOSC6Q5RKV6 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
EXOSC6Q5RKV6 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
EXOSC6Q5RKV6 GPX1P1-201ENST00000388829 606 ntBASIC18.59■□□□□ 0.57
EXOSC6Q5RKV6 LSM12P1-201ENST00000411836 588 ntBASIC18.59■□□□□ 0.57
EXOSC6Q5RKV6 BX276092.2-201ENST00000417668 665 ntBASIC18.59■□□□□ 0.57
EXOSC6Q5RKV6 TSPY6P-201ENST00000448518 926 ntBASIC18.59■□□□□ 0.57
EXOSC6Q5RKV6 AC006970.2-201ENST00000450065 779 ntBASIC18.59■□□□□ 0.57
EXOSC6Q5RKV6 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC18.59■□□□□ 0.57
EXOSC6Q5RKV6 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
EXOSC6Q5RKV6 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
EXOSC6Q5RKV6 AC092666.2-201ENST00000613287 246 ntBASIC18.59■□□□□ 0.57
EXOSC6Q5RKV6 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC18.59■□□□□ 0.57
EXOSC6Q5RKV6 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC18.59■□□□□ 0.57
EXOSC6Q5RKV6 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
EXOSC6Q5RKV6 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC18.59■□□□□ 0.57
EXOSC6Q5RKV6 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
EXOSC6Q5RKV6 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
EXOSC6Q5RKV6 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
EXOSC6Q5RKV6 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
EXOSC6Q5RKV6 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.57
EXOSC6Q5RKV6 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.57
EXOSC6Q5RKV6 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
EXOSC6Q5RKV6 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
EXOSC6Q5RKV6 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC18.58■□□□□ 0.57
EXOSC6Q5RKV6 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
EXOSC6Q5RKV6 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
EXOSC6Q5RKV6 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
EXOSC6Q5RKV6 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC18.58■□□□□ 0.56
EXOSC6Q5RKV6 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 18.4 ms