Protein–RNA interactions for Protein: Q495M9

USH1G, Usher syndrome type-1G protein, humanhuman

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH1GQ495M9 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
USH1GQ495M9 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
USH1GQ495M9 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC23.1■■□□□ 1.29
USH1GQ495M9 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
USH1GQ495M9 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC23.09■■□□□ 1.29
USH1GQ495M9 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC23.09■■□□□ 1.29
USH1GQ495M9 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC23.09■■□□□ 1.29
USH1GQ495M9 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC23.09■■□□□ 1.29
USH1GQ495M9 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC23.09■■□□□ 1.29
USH1GQ495M9 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
USH1GQ495M9 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC23.09■■□□□ 1.29
USH1GQ495M9 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
USH1GQ495M9 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
USH1GQ495M9 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC23.09■■□□□ 1.29
USH1GQ495M9 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC23.09■■□□□ 1.29
USH1GQ495M9 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
USH1GQ495M9 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC23.09■■□□□ 1.29
USH1GQ495M9 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC23.08■■□□□ 1.29
USH1GQ495M9 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
USH1GQ495M9 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC23.08■■□□□ 1.29
USH1GQ495M9 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
USH1GQ495M9 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC23.08■■□□□ 1.29
USH1GQ495M9 AC239809.2-201ENST00000415381 517 ntBASIC23.08■■□□□ 1.29
USH1GQ495M9 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
USH1GQ495M9 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC23.08■■□□□ 1.29
USH1GQ495M9 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC23.08■■□□□ 1.29
USH1GQ495M9 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC23.08■■□□□ 1.29
USH1GQ495M9 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
USH1GQ495M9 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
USH1GQ495M9 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC23.08■■□□□ 1.28
USH1GQ495M9 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
USH1GQ495M9 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC23.08■■□□□ 1.28
USH1GQ495M9 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC23.08■■□□□ 1.28
USH1GQ495M9 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC23.07■■□□□ 1.28
USH1GQ495M9 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC23.07■■□□□ 1.28
USH1GQ495M9 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC23.07■■□□□ 1.28
USH1GQ495M9 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC23.07■■□□□ 1.28
USH1GQ495M9 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC23.07■■□□□ 1.28
USH1GQ495M9 ME2-216ENST00000639850 2331 ntTSL 5 BASIC23.07■■□□□ 1.28
USH1GQ495M9 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC23.07■■□□□ 1.28
USH1GQ495M9 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
USH1GQ495M9 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC23.07■■□□□ 1.28
USH1GQ495M9 SERF2-207ENST00000409614 582 ntTSL 2 BASIC23.07■■□□□ 1.28
USH1GQ495M9 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
USH1GQ495M9 RPS2P4-201ENST00000476944 856 ntBASIC23.07■■□□□ 1.28
USH1GQ495M9 AC008550.1-201ENST00000511500 884 ntBASIC23.07■■□□□ 1.28
USH1GQ495M9 AC124016.1-201ENST00000609552 612 ntBASIC23.07■■□□□ 1.28
USH1GQ495M9 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC23.07■■□□□ 1.28
USH1GQ495M9 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC23.07■■□□□ 1.28
USH1GQ495M9 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC23.07■■□□□ 1.28
USH1GQ495M9 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
USH1GQ495M9 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC23.06■■□□□ 1.28
USH1GQ495M9 AC092720.2-201ENST00000602388 1665 ntBASIC23.06■■□□□ 1.28
USH1GQ495M9 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC23.06■■□□□ 1.28
USH1GQ495M9 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC23.06■■□□□ 1.28
USH1GQ495M9 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC23.06■■□□□ 1.28
USH1GQ495M9 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
USH1GQ495M9 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
USH1GQ495M9 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC23.06■■□□□ 1.28
USH1GQ495M9 KRASP1-201ENST00000407852 552 ntBASIC23.06■■□□□ 1.28
USH1GQ495M9 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC23.06■■□□□ 1.28
USH1GQ495M9 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC23.06■■□□□ 1.28
USH1GQ495M9 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC23.06■■□□□ 1.28
USH1GQ495M9 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC23.06■■□□□ 1.28
USH1GQ495M9 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC23.06■■□□□ 1.28
USH1GQ495M9 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC23.06■■□□□ 1.28
USH1GQ495M9 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC23.06■■□□□ 1.28
USH1GQ495M9 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
USH1GQ495M9 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC23.06■■□□□ 1.28
USH1GQ495M9 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC23.06■■□□□ 1.28
USH1GQ495M9 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
USH1GQ495M9 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
USH1GQ495M9 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC23.06■■□□□ 1.28
USH1GQ495M9 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
USH1GQ495M9 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
USH1GQ495M9 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC23.05■■□□□ 1.28
USH1GQ495M9 HLA-G-202ENST00000376815 851 ntBASIC23.05■■□□□ 1.28
USH1GQ495M9 HLA-G-203ENST00000376818 1127 ntBASIC23.05■■□□□ 1.28
USH1GQ495M9 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC23.05■■□□□ 1.28
USH1GQ495M9 TK2-204ENST00000525974 1178 ntTSL 2 BASIC23.05■■□□□ 1.28
USH1GQ495M9 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC23.05■■□□□ 1.28
USH1GQ495M9 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
USH1GQ495M9 AL031963.3-201ENST00000606441 850 ntBASIC23.05■■□□□ 1.28
USH1GQ495M9 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
USH1GQ495M9 KRT8P20-201ENST00000423953 1409 ntBASIC23.05■■□□□ 1.28
USH1GQ495M9 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC23.05■■□□□ 1.28
USH1GQ495M9 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC23.05■■□□□ 1.28
USH1GQ495M9 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
USH1GQ495M9 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC23.05■■□□□ 1.28
USH1GQ495M9 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC23.04■■□□□ 1.28
USH1GQ495M9 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
USH1GQ495M9 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC23.04■■□□□ 1.28
USH1GQ495M9 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
USH1GQ495M9 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC23.04■■□□□ 1.28
USH1GQ495M9 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
USH1GQ495M9 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
USH1GQ495M9 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC23.04■■□□□ 1.28
USH1GQ495M9 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
USH1GQ495M9 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
USH1GQ495M9 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC23.04■■□□□ 1.28
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms