Protein–RNA interactions for Protein: Q3KNV8

PCGF3, Polycomb group RING finger protein 3, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF3Q3KNV8 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PCGF3Q3KNV8 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
PCGF3Q3KNV8 STX6-204ENST00000542060 4809 ntTSL 2 BASIC17.73■□□□□ 0.43
PCGF3Q3KNV8 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PCGF3Q3KNV8 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
PCGF3Q3KNV8 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC17.72■□□□□ 0.43
PCGF3Q3KNV8 AL512408.1-201ENST00000569378 2000 ntBASIC17.72■□□□□ 0.43
PCGF3Q3KNV8 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC17.72■□□□□ 0.43
PCGF3Q3KNV8 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PCGF3Q3KNV8 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
PCGF3Q3KNV8 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
PCGF3Q3KNV8 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC17.72■□□□□ 0.43
PCGF3Q3KNV8 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PCGF3Q3KNV8 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC17.72■□□□□ 0.43
PCGF3Q3KNV8 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC17.72■□□□□ 0.43
PCGF3Q3KNV8 CD44-222ENST00000526025 1052 ntTSL 2 BASIC17.72■□□□□ 0.43
PCGF3Q3KNV8 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC17.72■□□□□ 0.43
PCGF3Q3KNV8 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC17.72■□□□□ 0.43
PCGF3Q3KNV8 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC17.72■□□□□ 0.43
PCGF3Q3KNV8 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PCGF3Q3KNV8 AL591742.1-201ENST00000604433 565 ntBASIC17.72■□□□□ 0.43
PCGF3Q3KNV8 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC17.72■□□□□ 0.43
PCGF3Q3KNV8 AC008694.1-202ENST00000636953 945 ntBASIC17.72■□□□□ 0.43
PCGF3Q3KNV8 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PCGF3Q3KNV8 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
PCGF3Q3KNV8 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
PCGF3Q3KNV8 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC17.72■□□□□ 0.43
PCGF3Q3KNV8 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PCGF3Q3KNV8 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PCGF3Q3KNV8 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
PCGF3Q3KNV8 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC17.72■□□□□ 0.43
PCGF3Q3KNV8 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
PCGF3Q3KNV8 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PCGF3Q3KNV8 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC17.72■□□□□ 0.43
PCGF3Q3KNV8 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
PCGF3Q3KNV8 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
PCGF3Q3KNV8 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PCGF3Q3KNV8 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PCGF3Q3KNV8 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PCGF3Q3KNV8 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC17.71■□□□□ 0.43
PCGF3Q3KNV8 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC17.71■□□□□ 0.43
PCGF3Q3KNV8 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC17.71■□□□□ 0.43
PCGF3Q3KNV8 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PCGF3Q3KNV8 GPX1P1-201ENST00000388829 606 ntBASIC17.71■□□□□ 0.43
PCGF3Q3KNV8 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC17.71■□□□□ 0.43
PCGF3Q3KNV8 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC17.71■□□□□ 0.43
PCGF3Q3KNV8 AC069236.1-201ENST00000604339 616 ntBASIC17.71■□□□□ 0.43
PCGF3Q3KNV8 AL121832.2-201ENST00000610979 668 ntBASIC17.71■□□□□ 0.43
PCGF3Q3KNV8 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
PCGF3Q3KNV8 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
PCGF3Q3KNV8 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PCGF3Q3KNV8 SMG8-203ENST00000578922 2178 ntBASIC17.71■□□□□ 0.43
PCGF3Q3KNV8 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC17.71■□□□□ 0.43
PCGF3Q3KNV8 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
PCGF3Q3KNV8 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC17.71■□□□□ 0.42
PCGF3Q3KNV8 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
PCGF3Q3KNV8 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
PCGF3Q3KNV8 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC17.7■□□□□ 0.42
PCGF3Q3KNV8 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PCGF3Q3KNV8 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC17.7■□□□□ 0.42
PCGF3Q3KNV8 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PCGF3Q3KNV8 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
PCGF3Q3KNV8 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PCGF3Q3KNV8 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
PCGF3Q3KNV8 BID-203ENST00000399765 1879 ntTSL 2 BASIC17.7■□□□□ 0.42
PCGF3Q3KNV8 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PCGF3Q3KNV8 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
PCGF3Q3KNV8 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
PCGF3Q3KNV8 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC17.7■□□□□ 0.42
PCGF3Q3KNV8 PBX1-209ENST00000485769 834 ntTSL 2 BASIC17.7■□□□□ 0.42
PCGF3Q3KNV8 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
PCGF3Q3KNV8 AC133552.2-202ENST00000575694 574 ntBASIC17.7■□□□□ 0.42
PCGF3Q3KNV8 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PCGF3Q3KNV8 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PCGF3Q3KNV8 AL162377.1-201ENST00000618844 1793 ntBASIC17.7■□□□□ 0.42
PCGF3Q3KNV8 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
PCGF3Q3KNV8 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
PCGF3Q3KNV8 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
PCGF3Q3KNV8 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC17.69■□□□□ 0.42
PCGF3Q3KNV8 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PCGF3Q3KNV8 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
PCGF3Q3KNV8 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC17.69■□□□□ 0.42
PCGF3Q3KNV8 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PCGF3Q3KNV8 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC17.69■□□□□ 0.42
PCGF3Q3KNV8 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
PCGF3Q3KNV8 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
PCGF3Q3KNV8 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PCGF3Q3KNV8 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
PCGF3Q3KNV8 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PCGF3Q3KNV8 APTR-203ENST00000430801 583 ntTSL 5 BASIC17.69■□□□□ 0.42
PCGF3Q3KNV8 UQCRFS1P1-201ENST00000435169 820 ntBASIC17.69■□□□□ 0.42
PCGF3Q3KNV8 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC17.69■□□□□ 0.42
PCGF3Q3KNV8 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC17.69■□□□□ 0.42
PCGF3Q3KNV8 OR10C1-204ENST00000622521 1039 ntBASIC17.69■□□□□ 0.42
PCGF3Q3KNV8 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PCGF3Q3KNV8 AC068338.2-201ENST00000563278 1430 ntBASIC17.69■□□□□ 0.42
PCGF3Q3KNV8 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC17.69■□□□□ 0.42
PCGF3Q3KNV8 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC17.69■□□□□ 0.42
PCGF3Q3KNV8 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
PCGF3Q3KNV8 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms