Protein–RNA interactions for Protein: Q12428

PDH1, Probable 2-methylcitrate dehydratase, yeastyeast

Known RBP Predictions only

Length 516 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
PDH1Q12428 KAP122YGL016W 3246 nt1.55□□□□□ -2.16
PDH1Q12428 ALK1YGL021W 2283 nt1.55□□□□□ -2.16
PDH1Q12428 INA22YIR024C 651 nt1.55□□□□□ -2.16
PDH1Q12428 PFD1YJL179W 330 nt1.55□□□□□ -2.16
PDH1Q12428 YBR064WYBR064W 429 nt1.55□□□□□ -2.16
PDH1Q12428 RPL34BYIL052C 366 nt1.54□□□□□ -2.16
PDH1Q12428 COF1YLL050C 432 nt1.54□□□□□ -2.16
PDH1Q12428 IRA1YBR140C 9279 nt1.53□□□□□ -2.16
PDH1Q12428 YIR044CYIR044C 186 nt1.53□□□□□ -2.16
PDH1Q12428 YJL197C-AYJL197C-A 282 nt1.53□□□□□ -2.16
PDH1Q12428 VPS55YJR044C 423 nt1.53□□□□□ -2.16
PDH1Q12428 YLR120W-AYLR120W-A 102 nt1.53□□□□□ -2.16
PDH1Q12428 YGR109W-BYGR109W-B 4644 nt1.52□□□□□ -2.17
PDH1Q12428 snR80snR80 171 nt1.52□□□□□ -2.17
PDH1Q12428 YGL052WYGL052W 306 nt1.52□□□□□ -2.17
PDH1Q12428 YLR140WYLR140W 327 nt1.52□□□□□ -2.17
PDH1Q12428 YOR015WYOR015W 360 nt1.52□□□□□ -2.17
PDH1Q12428 SSK2YNR031C 4740 nt1.52□□□□□ -2.17
PDH1Q12428 SPC110YDR356W 2835 nt1.52□□□□□ -2.17
PDH1Q12428 PDE2YOR360C 1581 nt1.51□□□□□ -2.17
PDH1Q12428 NOC3YLR002C 1992 nt1.51□□□□□ -2.17
PDH1Q12428 ABF2YMR072W 552 nt1.51□□□□□ -2.17
PDH1Q12428 YMR175W-AYMR175W-A 195 nt1.51□□□□□ -2.17
PDH1Q12428 YOL155W-AYOL155W-A 135 nt1.51□□□□□ -2.17
PDH1Q12428 VPS54YDR027C 2670 nt1.5□□□□□ -2.17
PDH1Q12428 YCS4YLR272C 3531 nt1.5□□□□□ -2.17
PDH1Q12428 YMR172C-AYMR172C-A 384 nt1.5□□□□□ -2.17
PDH1Q12428 YMR321CYMR321C 318 nt1.5□□□□□ -2.17
PDH1Q12428 UFD2YDL190C 2886 nt1.5□□□□□ -2.17
PDH1Q12428 EST2YLR318W 2655 nt1.49□□□□□ -2.17
PDH1Q12428 SPG3YDR504C 384 nt1.49□□□□□ -2.17
PDH1Q12428 RPS27BYHR021C 249 nt1.49□□□□□ -2.17
PDH1Q12428 YOR218CYOR218C 420 nt1.49□□□□□ -2.17
PDH1Q12428 CCH1YGR217W 6120 nt1.49□□□□□ -2.17
PDH1Q12428 SPO75YLL005C 2607 nt1.49□□□□□ -2.17
PDH1Q12428 CUL3YGR003W 2235 nt1.48□□□□□ -2.17
PDH1Q12428 snR55snR55 98 nt1.48□□□□□ -2.17
PDH1Q12428 YGL041CYGL041C 204 nt1.48□□□□□ -2.17
PDH1Q12428 IES4YOR189W 351 nt1.48□□□□□ -2.17
PDH1Q12428 YOR376WYOR376W 369 nt1.48□□□□□ -2.17
PDH1Q12428 MSN5YDR335W 3675 nt1.48□□□□□ -2.17
PDH1Q12428 SLI15YBR156C 2097 nt1.47□□□□□ -2.17
PDH1Q12428 LAA1YJL207C 6045 nt1.47□□□□□ -2.17
PDH1Q12428 CDC36YDL165W 576 nt1.47□□□□□ -2.17
PDH1Q12428 YJL120WYJL120W 324 nt1.47□□□□□ -2.17
PDH1Q12428 RPS25BYLR333C 327 nt1.47□□□□□ -2.17
PDH1Q12428 YOR011W-AYOR011W-A 207 nt1.47□□□□□ -2.17
PDH1Q12428 PTP2YOR208W 2253 nt1.47□□□□□ -2.17
PDH1Q12428 SPO21YOL091W 1830 nt1.47□□□□□ -2.17
PDH1Q12428 POL5YEL055C 3069 nt1.46□□□□□ -2.18
PDH1Q12428 SEC5YDR166C 2916 nt1.46□□□□□ -2.18
PDH1Q12428 YMR307C-AYMR307C-A 195 nt1.46□□□□□ -2.18
PDH1Q12428 RAD50YNL250W 3939 nt1.46□□□□□ -2.18
PDH1Q12428 YLL007CYLL007C 1998 nt1.45□□□□□ -2.18
PDH1Q12428 YBL008W-AYBL008W-A 240 nt1.45□□□□□ -2.18
PDH1Q12428 COG4YPR105C 2586 nt1.45□□□□□ -2.18
PDH1Q12428 YPR092WYPR092W 306 nt1.44□□□□□ -2.18
PDH1Q12428 SMC4YLR086W 4257 nt1.44□□□□□ -2.18
PDH1Q12428 NUT1YGL151W 3399 nt1.44□□□□□ -2.18
PDH1Q12428 PKH2YOL100W 3246 nt1.44□□□□□ -2.18
PDH1Q12428 IML1YJR138W 4755 nt1.43□□□□□ -2.18
PDH1Q12428 JLP2YMR132C 627 nt1.43□□□□□ -2.18
PDH1Q12428 YOR161W-BYOR161W-B 261 nt1.43□□□□□ -2.18
PDH1Q12428 AZF1YOR113W 2745 nt1.43□□□□□ -2.18
PDH1Q12428 NPR2YEL062W 1848 nt1.43□□□□□ -2.18
PDH1Q12428 tF(GAA)QtF(GAA)Q 75 nt1.42□□□□□ -2.18
PDH1Q12428 YDR521WYDR521W 336 nt1.42□□□□□ -2.18
PDH1Q12428 YGL217CYGL217C 342 nt1.42□□□□□ -2.18
PDH1Q12428 tM(CAU)Q1tM(CAU)Q1 76 nt1.42□□□□□ -2.18
PDH1Q12428 SEC21YNL287W 2808 nt1.42□□□□□ -2.18
PDH1Q12428 CLU1YMR012W 3834 nt1.42□□□□□ -2.18
PDH1Q12428 YLL054CYLL054C 2532 nt1.41□□□□□ -2.18
PDH1Q12428 PBY1YBR094W 2262 nt1.41□□□□□ -2.18
PDH1Q12428 YBR174CYBR174C 315 nt1.41□□□□□ -2.18
PDH1Q12428 SLX4YLR135W 2247 nt1.4□□□□□ -2.18
PDH1Q12428 GPG1YGL121C 381 nt1.4□□□□□ -2.19
PDH1Q12428 BLI1YKL061W 342 nt1.4□□□□□ -2.19
PDH1Q12428 MCM10YIL150C 1716 nt1.4□□□□□ -2.19
PDH1Q12428 IFH1YLR223C 3258 nt1.39□□□□□ -2.19
PDH1Q12428 HKR1YDR420W 5409 nt1.39□□□□□ -2.19
PDH1Q12428 snR74snR74 88 nt1.39□□□□□ -2.19
PDH1Q12428 tH(GUG)E1tH(GUG)E1 72 nt1.39□□□□□ -2.19
PDH1Q12428 tH(GUG)E2tH(GUG)E2 72 nt1.39□□□□□ -2.19
PDH1Q12428 tH(GUG)G1tH(GUG)G1 72 nt1.39□□□□□ -2.19
PDH1Q12428 tH(GUG)G2tH(GUG)G2 72 nt1.39□□□□□ -2.19
PDH1Q12428 tH(GUG)HtH(GUG)H 72 nt1.39□□□□□ -2.19
PDH1Q12428 tH(GUG)KtH(GUG)K 72 nt1.39□□□□□ -2.19
PDH1Q12428 tH(GUG)MtH(GUG)M 72 nt1.39□□□□□ -2.19
PDH1Q12428 RRT15YLR162W-A 189 nt1.39□□□□□ -2.19
PDH1Q12428 SGF11YPL047W 300 nt1.38□□□□□ -2.19
PDH1Q12428 PIK1YNL267W 3201 nt1.38□□□□□ -2.19
PDH1Q12428 YMR046W-AYMR046W-A 129 nt1.37□□□□□ -2.19
PDH1Q12428 YBR206WYBR206W 324 nt1.37□□□□□ -2.19
PDH1Q12428 YDL206WYDL206W 2289 nt1.36□□□□□ -2.19
PDH1Q12428 RSM22YKL155C 1887 nt1.36□□□□□ -2.19
PDH1Q12428 YBR182C-AYBR182C-A 195 nt1.36□□□□□ -2.19
PDH1Q12428 TTI1YKL033W 3117 nt1.36□□□□□ -2.19
PDH1Q12428 ALY2YJL084C 3141 nt1.35□□□□□ -2.19
PDH1Q12428 AIM44YPL158C 2277 nt1.35□□□□□ -2.19
PDH1Q12428 YDR406W-AYDR406W-A 246 nt1.35□□□□□ -2.19
Retrieved 100 of 7,029 protein–RNA pairs in 29.9 ms