Protein–RNA interactions for Protein: Q05541

NSE3, Non-structural maintenance of chromosome element 3, yeastyeast

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
NSE3Q05541 COA6YMR244C-A 315 nt2.08□□□□□ -2.08
NSE3Q05541 COG4YPR105C 2586 nt2.08□□□□□ -2.08
NSE3Q05541 DNF3YMR162C 4971 nt2.08□□□□□ -2.08
NSE3Q05541 PKH3YDR466W 2697 nt2.08□□□□□ -2.08
NSE3Q05541 SPO21YOL091W 1830 nt2.07□□□□□ -2.08
NSE3Q05541 RPL31AYDL075W 342 nt2.07□□□□□ -2.08
NSE3Q05541 YGL041CYGL041C 204 nt2.07□□□□□ -2.08
NSE3Q05541 BLI1YKL061W 342 nt2.07□□□□□ -2.08
NSE3Q05541 JLP2YMR132C 627 nt2.07□□□□□ -2.08
NSE3Q05541 YOR011W-AYOR011W-A 207 nt2.07□□□□□ -2.08
NSE3Q05541 PKH2YOL100W 3246 nt2.07□□□□□ -2.08
NSE3Q05541 CTF4YPR135W 2784 nt2.06□□□□□ -2.08
NSE3Q05541 RAD50YNL250W 3939 nt2.06□□□□□ -2.08
NSE3Q05541 KCS1YDR017C 3153 nt2.06□□□□□ -2.08
NSE3Q05541 GPG1YGL121C 381 nt2.06□□□□□ -2.08
NSE3Q05541 VPS55YJR044C 423 nt2.06□□□□□ -2.08
NSE3Q05541 YPR092WYPR092W 306 nt2.06□□□□□ -2.08
NSE3Q05541 UFD2YDL190C 2886 nt2.06□□□□□ -2.08
NSE3Q05541 MCM10YIL150C 1716 nt2.05□□□□□ -2.08
NSE3Q05541 GCN2YDR283C 4980 nt2.05□□□□□ -2.08
NSE3Q05541 PBY1YBR094W 2262 nt2.05□□□□□ -2.08
NSE3Q05541 ALK1YGL021W 2283 nt2.05□□□□□ -2.08
NSE3Q05541 YBL008W-AYBL008W-A 240 nt2.04□□□□□ -2.08
NSE3Q05541 YMR046W-AYMR046W-A 129 nt2.04□□□□□ -2.08
NSE3Q05541 BRR2YER172C 6492 nt2.04□□□□□ -2.08
NSE3Q05541 IFH1YLR223C 3258 nt2.04□□□□□ -2.08
NSE3Q05541 tF(GAA)QtF(GAA)Q 75 nt2.03□□□□□ -2.08
NSE3Q05541 YBR174CYBR174C 315 nt2.03□□□□□ -2.08
NSE3Q05541 YCS4YLR272C 3531 nt2.03□□□□□ -2.08
NSE3Q05541 SBE22YHR103W 2559 nt2.02□□□□□ -2.09
NSE3Q05541 RRT15YLR162W-A 189 nt2.02□□□□□ -2.09
NSE3Q05541 YDR521WYDR521W 336 nt2.01□□□□□ -2.09
NSE3Q05541 COF1YLL050C 432 nt2.01□□□□□ -2.09
NSE3Q05541 YOR376WYOR376W 369 nt2.01□□□□□ -2.09
NSE3Q05541 YLL054CYLL054C 2532 nt2.01□□□□□ -2.09
NSE3Q05541 MEC1YBR136W 7107 nt2.01□□□□□ -2.09
NSE3Q05541 CAT8YMR280C 4302 nt2.01□□□□□ -2.09
NSE3Q05541 YGL217CYGL217C 342 nt2□□□□□ -2.09
NSE3Q05541 ALY2YJL084C 3141 nt2□□□□□ -2.09
NSE3Q05541 YJL022WYJL022W 309 nt1.99□□□□□ -2.09
NSE3Q05541 AIM44YPL158C 2277 nt1.99□□□□□ -2.09
NSE3Q05541 SLX4YLR135W 2247 nt1.98□□□□□ -2.09
NSE3Q05541 PFD1YJL179W 330 nt1.98□□□□□ -2.09
NSE3Q05541 NCA2YPR155C 1851 nt1.98□□□□□ -2.09
NSE3Q05541 NPR2YEL062W 1848 nt1.98□□□□□ -2.09
NSE3Q05541 CHS1YNL192W 3396 nt1.97□□□□□ -2.09
NSE3Q05541 YDR406W-AYDR406W-A 246 nt1.97□□□□□ -2.09
NSE3Q05541 SGF11YPL047W 300 nt1.97□□□□□ -2.09
NSE3Q05541 SMC4YLR086W 4257 nt1.97□□□□□ -2.09
NSE3Q05541 MMS4YBR098W 2076 nt1.97□□□□□ -2.09
NSE3Q05541 YOR019WYOR019W 2193 nt1.96□□□□□ -2.1
NSE3Q05541 YHR210CYHR210C 1026 nt1.96□□□□□ -2.1
NSE3Q05541 CDC31YOR257W 486 nt1.96□□□□□ -2.1
NSE3Q05541 YLR140WYLR140W 327 nt1.95□□□□□ -2.1
NSE3Q05541 YOR072W-BYOR072W-B 162 nt1.95□□□□□ -2.1
NSE3Q05541 PIP2YOR363C 2991 nt1.95□□□□□ -2.1
NSE3Q05541 YBR182C-AYBR182C-A 195 nt1.95□□□□□ -2.1
NSE3Q05541 tT(UGU)HtT(UGU)H 72 nt1.94□□□□□ -2.1
NSE3Q05541 APQ12YIL040W 417 nt1.94□□□□□ -2.1
NSE3Q05541 YMR247W-AYMR247W-A 144 nt1.94□□□□□ -2.1
NSE3Q05541 YBR206WYBR206W 324 nt1.94□□□□□ -2.1
NSE3Q05541 YKU70YMR284W 1809 nt1.94□□□□□ -2.1
NSE3Q05541 YDL206WYDL206W 2289 nt1.93□□□□□ -2.1
NSE3Q05541 PAN2YGL094C 3348 nt1.93□□□□□ -2.1
NSE3Q05541 YOR161W-BYOR161W-B 261 nt1.93□□□□□ -2.1
NSE3Q05541 KAP122YGL016W 3246 nt1.93□□□□□ -2.1
NSE3Q05541 BST1YFL025C 3090 nt1.93□□□□□ -2.1
NSE3Q05541 snR74snR74 88 nt1.92□□□□□ -2.1
NSE3Q05541 YIR030W-AYIR030W-A 384 nt1.92□□□□□ -2.1
NSE3Q05541 MSH3YCR092C 3057 nt1.92□□□□□ -2.1
NSE3Q05541 MON2YNL297C 4911 nt1.92□□□□□ -2.1
NSE3Q05541 SLD3YGL113W 2007 nt1.9□□□□□ -2.11
NSE3Q05541 ISD11YER048W-A 285 nt1.9□□□□□ -2.11
NSE3Q05541 YOR302WYOR302W 78 nt1.9□□□□□ -2.11
NSE3Q05541 ECM12YHR021W-A 456 nt1.89□□□□□ -2.11
NSE3Q05541 YLR422WYLR422W 5799 nt1.89□□□□□ -2.11
NSE3Q05541 LRE1YCL051W 1752 nt1.89□□□□□ -2.11
NSE3Q05541 YNL337WYNL337W 255 nt1.88□□□□□ -2.11
NSE3Q05541 AHC1YOR023C 1701 nt1.87□□□□□ -2.11
NSE3Q05541 snR14snR14 160 nt1.86□□□□□ -2.11
NSE3Q05541 BPH1YCR032W 6504 nt1.86□□□□□ -2.11
NSE3Q05541 FIG4YNL325C 2640 nt1.86□□□□□ -2.11
NSE3Q05541 OLI1Q0130 231 nt1.85□□□□□ -2.11
NSE3Q05541 YGR109W-BYGR109W-B 4644 nt1.85□□□□□ -2.11
NSE3Q05541 YLL019W-AYLL019W-A 93 nt1.84□□□□□ -2.11
NSE3Q05541 FIG2YCR089W 4830 nt1.84□□□□□ -2.12
NSE3Q05541 SWI4YER111C 3282 nt1.83□□□□□ -2.12
NSE3Q05541 CLU1YMR012W 3834 nt1.82□□□□□ -2.12
NSE3Q05541 YAR009CYAR009C 3591 nt1.82□□□□□ -2.12
NSE3Q05541 YLR419WYLR419W 4308 nt1.82□□□□□ -2.12
NSE3Q05541 ULI1YFR026C 510 nt1.81□□□□□ -2.12
NSE3Q05541 PAM16YJL104W 450 nt1.81□□□□□ -2.12
NSE3Q05541 EST2YLR318W 2655 nt1.81□□□□□ -2.12
NSE3Q05541 AZF1YOR113W 2745 nt1.81□□□□□ -2.12
NSE3Q05541 SXM1YDR395W 2835 nt1.81□□□□□ -2.12
NSE3Q05541 SET3YKR029C 2256 nt1.79□□□□□ -2.12
NSE3Q05541 IRA1YBR140C 9279 nt1.79□□□□□ -2.12
NSE3Q05541 YDL185C-AYDL185C-A 228 nt1.79□□□□□ -2.12
NSE3Q05541 YDL196WYDL196W 330 nt1.79□□□□□ -2.12
NSE3Q05541 YEL014CYEL014C 306 nt1.79□□□□□ -2.12
Retrieved 100 of 7,029 protein–RNA pairs in 56 ms