Protein–RNA interactions for Protein: Q02948

VPS30, Vacuolar protein sorting-associated protein 30, yeastyeast

Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VPS30Q02948 snR52snR52 92 nt2.22□□□□□ -2.05
VPS30Q02948 GCN2YDR283C 4980 nt2.22□□□□□ -2.05
VPS30Q02948 REV3YPL167C 4515 nt2.21□□□□□ -2.05
VPS30Q02948 HER1YOR227W 3741 nt2.21□□□□□ -2.05
VPS30Q02948 HAL9YOL089C 3093 nt2.21□□□□□ -2.05
VPS30Q02948 CHC1YGL206C 4962 nt2.21□□□□□ -2.06
VPS30Q02948 ATG9YDL149W 2994 nt2.21□□□□□ -2.06
VPS30Q02948 USO1YDL058W 5373 nt2.21□□□□□ -2.06
VPS30Q02948 YDL118WYDL118W 381 nt2.21□□□□□ -2.06
VPS30Q02948 RPL33BYOR234C 324 nt2.21□□□□□ -2.06
VPS30Q02948 ZIP1YDR285W 2628 nt2.21□□□□□ -2.06
VPS30Q02948 MGA2YIR033W 3342 nt2.2□□□□□ -2.06
VPS30Q02948 PMP1YCR024C-A 123 nt2.2□□□□□ -2.06
VPS30Q02948 YCR087C-AYCR087C-A 462 nt2.2□□□□□ -2.06
VPS30Q02948 YOR108C-AYOR108C-A 210 nt2.2□□□□□ -2.06
VPS30Q02948 IFH1YLR223C 3258 nt2.2□□□□□ -2.06
VPS30Q02948 TFC8YPL007C 1767 nt2.2□□□□□ -2.06
VPS30Q02948 YGR164WYGR164W 336 nt2.19□□□□□ -2.06
VPS30Q02948 YOR072W-BYOR072W-B 162 nt2.19□□□□□ -2.06
VPS30Q02948 HIR3YJR140C 4947 nt2.18□□□□□ -2.06
VPS30Q02948 YDL196WYDL196W 330 nt2.18□□□□□ -2.06
VPS30Q02948 YOR161W-BYOR161W-B 261 nt2.18□□□□□ -2.06
VPS30Q02948 YOR343W-BYOR343W-B 5313 nt2.18□□□□□ -2.06
VPS30Q02948 YLR419WYLR419W 4308 nt2.18□□□□□ -2.06
VPS30Q02948 SAS3YBL052C 2496 nt2.17□□□□□ -2.06
VPS30Q02948 PIG1YLR273C 1947 nt2.17□□□□□ -2.06
VPS30Q02948 COY1YKL179C 2040 nt2.17□□□□□ -2.06
VPS30Q02948 CUL3YGR003W 2235 nt2.17□□□□□ -2.06
VPS30Q02948 YLL019W-AYLL019W-A 93 nt2.16□□□□□ -2.06
VPS30Q02948 PDR8YLR266C 2106 nt2.16□□□□□ -2.06
VPS30Q02948 MAK10YEL053C 2202 nt2.15□□□□□ -2.06
VPS30Q02948 FKS1YLR342W 5631 nt2.15□□□□□ -2.06
VPS30Q02948 YDR521WYDR521W 336 nt2.15□□□□□ -2.07
VPS30Q02948 MLH3YPL164C 2148 nt2.15□□□□□ -2.07
VPS30Q02948 SEC31YDL195W 3822 nt2.14□□□□□ -2.07
VPS30Q02948 YIR044CYIR044C 186 nt2.14□□□□□ -2.07
VPS30Q02948 YBL053WYBL053W 375 nt2.13□□□□□ -2.07
VPS30Q02948 AHC1YOR023C 1701 nt2.13□□□□□ -2.07
VPS30Q02948 PEP1YBL017C 4740 nt2.12□□□□□ -2.07
VPS30Q02948 YMR272W-BYMR272W-B 108 nt2.12□□□□□ -2.07
VPS30Q02948 DGR2YKL121W 2559 nt2.11□□□□□ -2.07
VPS30Q02948 YHR210CYHR210C 1026 nt2.11□□□□□ -2.07
VPS30Q02948 YBR206WYBR206W 324 nt2.11□□□□□ -2.07
VPS30Q02948 DCP2YNL118C 2913 nt2.11□□□□□ -2.07
VPS30Q02948 KIP1YBL063W 3336 nt2.11□□□□□ -2.07
VPS30Q02948 TBS1YBR150C 3285 nt2.1□□□□□ -2.07
VPS30Q02948 YEL073CYEL073C 324 nt2.1□□□□□ -2.07
VPS30Q02948 YLR035C-AYLR035C-A 3468 nt2.1□□□□□ -2.07
VPS30Q02948 CTR9YOL145C 3234 nt2.1□□□□□ -2.07
VPS30Q02948 SEY1YOR165W 2331 nt2.09□□□□□ -2.07
VPS30Q02948 NCA2YPR155C 1851 nt2.09□□□□□ -2.07
VPS30Q02948 HMI1YOL095C 2121 nt2.09□□□□□ -2.07
VPS30Q02948 YLL007CYLL007C 1998 nt2.09□□□□□ -2.07
VPS30Q02948 SEC63YOR254C 1992 nt2.09□□□□□ -2.07
VPS30Q02948 ALK1YGL021W 2283 nt2.09□□□□□ -2.07
VPS30Q02948 YIL134C-AYIL134C-A 204 nt2.09□□□□□ -2.07
VPS30Q02948 YMR175W-AYMR175W-A 195 nt2.09□□□□□ -2.07
VPS30Q02948 FIG4YNL325C 2640 nt2.09□□□□□ -2.08
VPS30Q02948 FAB1YFR019W 6837 nt2.09□□□□□ -2.08
VPS30Q02948 MSH6YDR097C 3729 nt2.08□□□□□ -2.08
VPS30Q02948 PRP42YDR235W 1635 nt2.08□□□□□ -2.08
VPS30Q02948 YGR109W-BYGR109W-B 4644 nt2.08□□□□□ -2.08
VPS30Q02948 SLD3YGL113W 2007 nt2.08□□□□□ -2.08
VPS30Q02948 TMA7YLR262C-A 195 nt2.07□□□□□ -2.08
VPS30Q02948 YNL144CYNL144C 2223 nt2.06□□□□□ -2.08
VPS30Q02948 PTP2YOR208W 2253 nt2.06□□□□□ -2.08
VPS30Q02948 AIM44YPL158C 2277 nt2.06□□□□□ -2.08
VPS30Q02948 YIL020C-AYIL020C-A 339 nt2.06□□□□□ -2.08
VPS30Q02948 UTP21YLR409C 2820 nt2.06□□□□□ -2.08
VPS30Q02948 MDS3YGL197W 4464 nt2.05□□□□□ -2.08
VPS30Q02948 PIP2YOR363C 2991 nt2.05□□□□□ -2.08
VPS30Q02948 UBR2YLR024C 5619 nt2.05□□□□□ -2.08
VPS30Q02948 YDR354C-AYDR354C-A 144 nt2.04□□□□□ -2.08
VPS30Q02948 YJL026C-AYJL026C-A 222 nt2.04□□□□□ -2.08
VPS30Q02948 NUT1YGL151W 3399 nt2.04□□□□□ -2.08
VPS30Q02948 IRE1YHR079C 3348 nt2.04□□□□□ -2.08
VPS30Q02948 COG4YPR105C 2586 nt2.04□□□□□ -2.08
VPS30Q02948 ANS1YHR126C 480 nt2.03□□□□□ -2.08
VPS30Q02948 YNL205CYNL205C 423 nt2.02□□□□□ -2.09
VPS30Q02948 TRM3YDL112W 4311 nt2.02□□□□□ -2.09
VPS30Q02948 YHR214C-BYHR214C-B 5382 nt2.02□□□□□ -2.09
VPS30Q02948 KCS1YDR017C 3153 nt2.02□□□□□ -2.09
VPS30Q02948 POL5YEL055C 3069 nt2.02□□□□□ -2.09
VPS30Q02948 tT(UGU)HtT(UGU)H 72 nt2.01□□□□□ -2.09
VPS30Q02948 MYO4YAL029C 4416 nt2.01□□□□□ -2.09
VPS30Q02948 YJR039WYJR039W 3366 nt2□□□□□ -2.09
VPS30Q02948 YPL044CYPL044C 549 nt2□□□□□ -2.09
VPS30Q02948 YMR045CYMR045C 5268 nt1.99□□□□□ -2.09
VPS30Q02948 SLI15YBR156C 2097 nt1.99□□□□□ -2.09
VPS30Q02948 snR85snR85 171 nt1.98□□□□□ -2.09
VPS30Q02948 RPS30BYOR182C 192 nt1.98□□□□□ -2.09
VPS30Q02948 snR48snR48 113 nt1.98□□□□□ -2.09
VPS30Q02948 ADR1YDR216W 3972 nt1.98□□□□□ -2.09
VPS30Q02948 FRK1YPL141C 2598 nt1.98□□□□□ -2.09
VPS30Q02948 PKH2YOL100W 3246 nt1.97□□□□□ -2.09
VPS30Q02948 YCS4YLR272C 3531 nt1.97□□□□□ -2.09
VPS30Q02948 SNU13YEL026W 381 nt1.97□□□□□ -2.09
VPS30Q02948 COX12YLR038C 252 nt1.97□□□□□ -2.09
VPS30Q02948 YBR221W-AYBR221W-A 105 nt1.97□□□□□ -2.09
VPS30Q02948 SFB2YNL049C 2631 nt1.97□□□□□ -2.09
Retrieved 100 of 7,029 protein–RNA pairs in 15.3 ms