Protein–RNA interactions for Protein: Q01560

NPL3, Nucleolar protein 3, yeastyeast

Known RBP RIP-Chip data

Length 414 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
NPL3Q01560 MLH3YPL164C 2148 nt2.3□□□□□ -2.04
NPL3Q01560 MSH5YDL154W 2706 nt2.3□□□□□ -2.04
NPL3Q01560 APL5YPL195W 2799 nt2.3□□□□□ -2.04
NPL3Q01560 YOR102WYOR102W 351 nt2.3□□□□□ -2.04
NPL3Q01560 PUT3YKL015W 2940 nt2.29□□□□□ -2.04
NPL3Q01560 RLM1YPL089C 2031 nt2.29□□□□□ -2.04 RIP-Chip
NPL3Q01560 YOR343W-BYOR343W-B 5313 nt2.28□□□□□ -2.04
NPL3Q01560 STH1YIL126W 4080 nt2.28□□□□□ -2.04
NPL3Q01560 ENV11YGR071C 2583 nt2.28□□□□□ -2.04
NPL3Q01560 USO1YDL058W 5373 nt2.27□□□□□ -2.05
NPL3Q01560 YER053C-AYER053C-A 114 nt2.27□□□□□ -2.05
NPL3Q01560 YLL019W-AYLL019W-A 93 nt2.27□□□□□ -2.05
NPL3Q01560 YBR174CYBR174C 315 nt2.27□□□□□ -2.05
NPL3Q01560 AGC1YPR021C 2709 nt2.27□□□□□ -2.05
NPL3Q01560 APL2YKL135C 2181 nt2.27□□□□□ -2.05
NPL3Q01560 SAP190YKR028W 3102 nt2.27□□□□□ -2.05
NPL3Q01560 RAD34YDR314C 2079 nt2.27□□□□□ -2.05
NPL3Q01560 CAT2YML042W 2013 nt2.27□□□□□ -2.05
NPL3Q01560 BUD2YKL092C 3315 nt2.27□□□□□ -2.05
NPL3Q01560 HER1YOR227W 3741 nt2.26□□□□□ -2.05
NPL3Q01560 YDL196WYDL196W 330 nt2.26□□□□□ -2.05
NPL3Q01560 DGR2YKL121W 2559 nt2.26□□□□□ -2.05
NPL3Q01560 NCA2YPR155C 1851 nt2.26□□□□□ -2.05
NPL3Q01560 MAD1YGL086W 2250 nt2.25□□□□□ -2.05
NPL3Q01560 UBP15YMR304W 3693 nt2.25□□□□□ -2.05
NPL3Q01560 INO80YGL150C 4470 nt2.25□□□□□ -2.05
NPL3Q01560 YBR099CYBR099C 384 nt2.25□□□□□ -2.05
NPL3Q01560 SPO75YLL005C 2607 nt2.25□□□□□ -2.05
NPL3Q01560 FRK1YPL141C 2598 nt2.24□□□□□ -2.05
NPL3Q01560 ATP7YKL016C 525 nt2.24□□□□□ -2.05
NPL3Q01560 TOF1YNL273W 3717 nt2.24□□□□□ -2.05
NPL3Q01560 SAP185YJL098W 3177 nt2.23□□□□□ -2.05
NPL3Q01560 YDL118WYDL118W 381 nt2.23□□□□□ -2.05
NPL3Q01560 YBR221W-AYBR221W-A 105 nt2.23□□□□□ -2.05
NPL3Q01560 YFR016CYFR016C 3702 nt2.23□□□□□ -2.05
NPL3Q01560 SEY1YOR165W 2331 nt2.23□□□□□ -2.05
NPL3Q01560 FIG4YNL325C 2640 nt2.22□□□□□ -2.05
NPL3Q01560 KOG1YHR186C 4674 nt2.22□□□□□ -2.05
NPL3Q01560 RPS25BYLR333C 327 nt2.22□□□□□ -2.05 RIP-Chip
NPL3Q01560 AIM44YPL158C 2277 nt2.21□□□□□ -2.06
NPL3Q01560 ATG11YPR049C 3537 nt2.21□□□□□ -2.06
NPL3Q01560 NOC3YLR002C 1992 nt2.2□□□□□ -2.06
NPL3Q01560 SEC63YOR254C 1992 nt2.2□□□□□ -2.06
NPL3Q01560 YCR095W-AYCR095W-A 159 nt2.2□□□□□ -2.06
NPL3Q01560 PAU3YCR104W 375 nt2.2□□□□□ -2.06
NPL3Q01560 YJL120WYJL120W 324 nt2.2□□□□□ -2.06
NPL3Q01560 IRC8YJL051W 2469 nt2.2□□□□□ -2.06
NPL3Q01560 SIR4YDR227W 4077 nt2.2□□□□□ -2.06
NPL3Q01560 snR61snR61 90 nt2.19□□□□□ -2.06
NPL3Q01560 TDA9YML081W 3756 nt2.19□□□□□ -2.06
NPL3Q01560 UTP22YGR090W 3714 nt2.18□□□□□ -2.06
NPL3Q01560 YHR180W-AYHR180W-A 183 nt2.18□□□□□ -2.06
NPL3Q01560 DNF1YER166W 4716 nt2.18□□□□□ -2.06 RIP-Chip
NPL3Q01560 HIR3YJR140C 4947 nt2.17□□□□□ -2.06
NPL3Q01560 PBY1YBR094W 2262 nt2.17□□□□□ -2.06
NPL3Q01560 YNL067W-BYNL067W-B 141 nt2.17□□□□□ -2.06
NPL3Q01560 YPL044CYPL044C 549 nt2.17□□□□□ -2.06
NPL3Q01560 PTP2YOR208W 2253 nt2.17□□□□□ -2.06
NPL3Q01560 AHC1YOR023C 1701 nt2.17□□□□□ -2.06
NPL3Q01560 PIP2YOR363C 2991 nt2.16□□□□□ -2.06
NPL3Q01560 TFC3YAL001C 3483 nt2.15□□□□□ -2.06
NPL3Q01560 RPL31AYDL075W 342 nt2.15□□□□□ -2.07 RIP-Chip
NPL3Q01560 PAA1YDR071C 576 nt2.15□□□□□ -2.07 RIP-Chip
NPL3Q01560 MYO4YAL029C 4416 nt2.14□□□□□ -2.07
NPL3Q01560 HAL9YOL089C 3093 nt2.14□□□□□ -2.07
NPL3Q01560 YNL144CYNL144C 2223 nt2.14□□□□□ -2.07
NPL3Q01560 SBH1YER087C-B 249 nt2.14□□□□□ -2.07 RIP-Chip
NPL3Q01560 FKS1YLR342W 5631 nt2.13□□□□□ -2.07
NPL3Q01560 UFD4YKL010C 4452 nt2.13□□□□□ -2.07
NPL3Q01560 YJL052C-AYJL052C-A 120 nt2.13□□□□□ -2.07
NPL3Q01560 YMR175W-AYMR175W-A 195 nt2.13□□□□□ -2.07
NPL3Q01560 CMC4YMR194C-B 222 nt2.13□□□□□ -2.07 RIP-Chip
NPL3Q01560 SBE22YHR103W 2559 nt2.13□□□□□ -2.07
NPL3Q01560 SFB2YNL049C 2631 nt2.13□□□□□ -2.07
NPL3Q01560 MSH6YDR097C 3729 nt2.13□□□□□ -2.07
NPL3Q01560 UBP2YOR124C 3819 nt2.12□□□□□ -2.07
NPL3Q01560 ANS1YHR126C 480 nt2.12□□□□□ -2.07
NPL3Q01560 YFR012W-AYFR012W-A 87 nt2.11□□□□□ -2.07
NPL3Q01560 CTF4YPR135W 2784 nt2.11□□□□□ -2.07
NPL3Q01560 ATG9YDL149W 2994 nt2.11□□□□□ -2.07
NPL3Q01560 UTP21YLR409C 2820 nt2.1□□□□□ -2.07
NPL3Q01560 tL(UAA)QtL(UAA)Q 85 nt2.1□□□□□ -2.07
NPL3Q01560 PDR8YLR266C 2106 nt2.1□□□□□ -2.07
NPL3Q01560 CDC31YOR257W 486 nt2.1□□□□□ -2.07
NPL3Q01560 SLD3YGL113W 2007 nt2.1□□□□□ -2.07
NPL3Q01560 YLR035C-AYLR035C-A 3468 nt2.1□□□□□ -2.07
NPL3Q01560 BRE1YDL074C 2103 nt2.09□□□□□ -2.07
NPL3Q01560 YLR282CYLR282C 342 nt2.09□□□□□ -2.07
NPL3Q01560 YNL211CYNL211C 261 nt2.09□□□□□ -2.07 RIP-Chip
NPL3Q01560 SLI15YBR156C 2097 nt2.09□□□□□ -2.07
NPL3Q01560 MGA2YIR033W 3342 nt2.08□□□□□ -2.08
NPL3Q01560 YCR038W-AYCR038W-A 126 nt2.08□□□□□ -2.08
NPL3Q01560 OST4YDL232W 111 nt2.08□□□□□ -2.08 RIP-Chip
NPL3Q01560 YGL041C-BYGL041C-B 183 nt2.08□□□□□ -2.08
NPL3Q01560 YIL134C-AYIL134C-A 204 nt2.08□□□□□ -2.08
NPL3Q01560 RPS30BYOR182C 192 nt2.08□□□□□ -2.08 RIP-Chip
NPL3Q01560 PKH2YOL100W 3246 nt2.07□□□□□ -2.08
NPL3Q01560 YIL142C-AYIL142C-A 333 nt2.07□□□□□ -2.08
NPL3Q01560 ALK1YGL021W 2283 nt2.07□□□□□ -2.08
NPL3Q01560 YMR045CYMR045C 5268 nt2.07□□□□□ -2.08
Retrieved 100 of 7,029 protein–RNA pairs in 35.3 ms