Protein–RNA interactions for Protein: Q01080

RPA49, DNA-directed RNA polymerase I subunit RPA49, yeastyeast

Predicted RBP Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPA49Q01080 GPG1YGL121C 381 nt1.27□□□□□ -2.21
RPA49Q01080 tV(UAC)BtV(UAC)B 74 nt1.27□□□□□ -2.21
RPA49Q01080 tV(UAC)DtV(UAC)D 74 nt1.27□□□□□ -2.21
RPA49Q01080 CLU1YMR012W 3834 nt1.26□□□□□ -2.21
RPA49Q01080 PTP2YOR208W 2253 nt1.26□□□□□ -2.21
RPA49Q01080 RPL35AYDL191W 363 nt1.26□□□□□ -2.21
RPA49Q01080 TTI1YKL033W 3117 nt1.25□□□□□ -2.21
RPA49Q01080 SIP4YJL089W 2490 nt1.25□□□□□ -2.21
RPA49Q01080 YDR169C-AYDR169C-A 150 nt1.25□□□□□ -2.21
RPA49Q01080 NIP100YPL174C 2607 nt1.25□□□□□ -2.21
RPA49Q01080 YNL284C-BYNL284C-B 5268 nt1.24□□□□□ -2.21
RPA49Q01080 YAR029WYAR029W 225 nt1.24□□□□□ -2.21
RPA49Q01080 YBR221W-AYBR221W-A 105 nt1.24□□□□□ -2.21
RPA49Q01080 APL3YBL037W 3078 nt1.24□□□□□ -2.21
RPA49Q01080 PDE2YOR360C 1581 nt1.24□□□□□ -2.21
RPA49Q01080 IFH1YLR223C 3258 nt1.23□□□□□ -2.21
RPA49Q01080 SET3YKR029C 2256 nt1.23□□□□□ -2.21
RPA49Q01080 STO1YMR125W 2586 nt1.23□□□□□ -2.21
RPA49Q01080 YBR200W-AYBR200W-A 165 nt1.23□□□□□ -2.21
RPA49Q01080 YDL206WYDL206W 2289 nt1.23□□□□□ -2.21
RPA49Q01080 YLL007CYLL007C 1998 nt1.23□□□□□ -2.21
RPA49Q01080 PBY1YBR094W 2262 nt1.22□□□□□ -2.21
RPA49Q01080 tR(ACG)Q2tR(ACG)Q2 74 nt1.22□□□□□ -2.21
RPA49Q01080 YHR007C-AYHR007C-A 216 nt1.22□□□□□ -2.21
RPA49Q01080 RPL34BYIL052C 366 nt1.22□□□□□ -2.21
RPA49Q01080 RAD9YDR217C 3930 nt1.21□□□□□ -2.21
RPA49Q01080 OST1YJL002C 1431 nt1.21□□□□□ -2.22
RPA49Q01080 CDC36YDL165W 576 nt1.2□□□□□ -2.22
RPA49Q01080 YJR011CYJR011C 786 nt1.2□□□□□ -2.22
RPA49Q01080 TAR1YLR154W-C 375 nt1.2□□□□□ -2.22
RPA49Q01080 SPT7YBR081C 3999 nt1.2□□□□□ -2.22
RPA49Q01080 SLD3YGL113W 2007 nt1.2□□□□□ -2.22
RPA49Q01080 SMC1YFL008W 3678 nt1.19□□□□□ -2.22
RPA49Q01080 PAN2YGL094C 3348 nt1.19□□□□□ -2.22
RPA49Q01080 YDL240C-AYDL240C-A 138 nt1.19□□□□□ -2.22
RPA49Q01080 YDR048CYDR048C 315 nt1.19□□□□□ -2.22
RPA49Q01080 YIL020C-AYIL020C-A 339 nt1.19□□□□□ -2.22
RPA49Q01080 YBL008W-AYBL008W-A 240 nt1.19□□□□□ -2.22
RPA49Q01080 HMRA2YCR096C 360 nt1.18□□□□□ -2.22
RPA49Q01080 EAF1YDR359C 2949 nt1.18□□□□□ -2.22
RPA49Q01080 YAF9YNL107W 681 nt1.17□□□□□ -2.22
RPA49Q01080 YAR009CYAR009C 3591 nt1.17□□□□□ -2.22
RPA49Q01080 WAR1YML076C 2835 nt1.17□□□□□ -2.22
RPA49Q01080 YCK3YER123W 1575 nt1.17□□□□□ -2.22
RPA49Q01080 STB6YKL072W 2301 nt1.15□□□□□ -2.23
RPA49Q01080 ROM2YLR371W 4071 nt1.15□□□□□ -2.23
RPA49Q01080 YDR102CYDR102C 333 nt1.15□□□□□ -2.23
RPA49Q01080 ATP6Q0085 780 nt1.15□□□□□ -2.23
RPA49Q01080 NST1YNL091W 3723 nt1.14□□□□□ -2.23
RPA49Q01080 YDR521WYDR521W 336 nt1.13□□□□□ -2.23
RPA49Q01080 NUP157YER105C 4176 nt1.11□□□□□ -2.23
RPA49Q01080 YJR029WYJR029W 5268 nt1.11□□□□□ -2.23
RPA49Q01080 YPR137C-BYPR137C-B 5268 nt1.11□□□□□ -2.23
RPA49Q01080 CDC39YCR093W 6327 nt1.1□□□□□ -2.23
RPA49Q01080 snR36snR36 182 nt1.1□□□□□ -2.23
RPA49Q01080 YKL136WYKL136W 399 nt1.09□□□□□ -2.23
RPA49Q01080 YBR206WYBR206W 324 nt1.09□□□□□ -2.23
RPA49Q01080 YDR183C-AYDR183C-A 258 nt1.08□□□□□ -2.24
RPA49Q01080 YHL042WYHL042W 453 nt1.08□□□□□ -2.24
RPA49Q01080 YPR117WYPR117W 7470 nt1.07□□□□□ -2.24
RPA49Q01080 DBP6YNR038W 1890 nt1.07□□□□□ -2.24
RPA49Q01080 GEA2YEL022W 4380 nt1.07□□□□□ -2.24
RPA49Q01080 YGL149WYGL149W 306 nt1.07□□□□□ -2.24
RPA49Q01080 YKL118WYKL118W 312 nt1.07□□□□□ -2.24
RPA49Q01080 RPS25BYLR333C 327 nt1.07□□□□□ -2.24
RPA49Q01080 APL1YJR005W 2103 nt1.07□□□□□ -2.24
RPA49Q01080 BEM2YER155C 6504 nt1.06□□□□□ -2.24
RPA49Q01080 HTL1YCR020W-B 237 nt1.06□□□□□ -2.24
RPA49Q01080 YDR524W-CYDR524W-C 90 nt1.06□□□□□ -2.24
RPA49Q01080 YOR011W-AYOR011W-A 207 nt1.06□□□□□ -2.24
RPA49Q01080 SSS1YDR086C 243 nt1.05□□□□□ -2.24
RPA49Q01080 STF2YGR008C 255 nt1.05□□□□□ -2.24
RPA49Q01080 YMR321CYMR321C 318 nt1.05□□□□□ -2.24
RPA49Q01080 YPL225WYPL225W 441 nt1.05□□□□□ -2.24
RPA49Q01080 YFL032WYFL032W 321 nt1.03□□□□□ -2.24
RPA49Q01080 ECM12YHR021W-A 456 nt1.03□□□□□ -2.24
RPA49Q01080 YBR064WYBR064W 429 nt1.03□□□□□ -2.24
RPA49Q01080 YDR413CYDR413C 576 nt1.02□□□□□ -2.25
RPA49Q01080 ISD11YER048W-A 285 nt1.02□□□□□ -2.25
RPA49Q01080 OLI1Q0130 231 nt1.02□□□□□ -2.25
RPA49Q01080 YIL032CYIL032C 357 nt1.02□□□□□ -2.25
RPA49Q01080 YJL120WYJL120W 324 nt1.02□□□□□ -2.25
RPA49Q01080 SPO21YOL091W 1830 nt1.02□□□□□ -2.25
RPA49Q01080 snR60snR60 104 nt1.01□□□□□ -2.25
RPA49Q01080 NHP2YDL208W 471 nt1.01□□□□□ -2.25
RPA49Q01080 YFL063WYFL063W 456 nt1.01□□□□□ -2.25
RPA49Q01080 YIL115W-AYIL115W-A 372 nt1.01□□□□□ -2.25
RPA49Q01080 RPL39YJL189W 156 nt1.01□□□□□ -2.25
RPA49Q01080 YMR193C-AYMR193C-A 387 nt1.01□□□□□ -2.25
RPA49Q01080 CSE2YNR010W 450 nt1.01□□□□□ -2.25
RPA49Q01080 VAM6YDL077C 3150 nt1.01□□□□□ -2.25
RPA49Q01080 UBP3YER151C 2739 nt1.01□□□□□ -2.25
RPA49Q01080 HUG1YML058W-A 207 nt1□□□□□ -2.25
RPA49Q01080 YOR218CYOR218C 420 nt1□□□□□ -2.25
RPA49Q01080 YOR282WYOR282W 321 nt1□□□□□ -2.25
RPA49Q01080 PAA1YDR071C 576 nt0.99□□□□□ -2.25
RPA49Q01080 ALG13YGL047W 609 nt0.99□□□□□ -2.25
RPA49Q01080 RPS27BYHR021C 249 nt0.99□□□□□ -2.25
RPA49Q01080 IES4YOR189W 351 nt0.99□□□□□ -2.25
RPA49Q01080 VIK1YPL253C 1944 nt0.99□□□□□ -2.25
Retrieved 100 of 7,029 protein–RNA pairs in 23.8 ms