Protein–RNA interactions for Protein: P78413

IRX4, Iroquois-class homeodomain protein IRX-4, humanhuman

Predictions only

Length 519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX4P78413 RNF146-206ENST00000480444 843 ntTSL 2 BASIC20.8■□□□□ 0.92
IRX4P78413 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC20.8■□□□□ 0.92
IRX4P78413 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC20.8■□□□□ 0.92
IRX4P78413 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
IRX4P78413 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
IRX4P78413 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
IRX4P78413 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
IRX4P78413 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
IRX4P78413 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
IRX4P78413 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
IRX4P78413 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
IRX4P78413 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
IRX4P78413 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
IRX4P78413 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
IRX4P78413 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
IRX4P78413 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
IRX4P78413 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
IRX4P78413 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC20.79■□□□□ 0.92
IRX4P78413 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
IRX4P78413 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
IRX4P78413 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC20.79■□□□□ 0.92
IRX4P78413 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC20.79■□□□□ 0.92
IRX4P78413 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC20.79■□□□□ 0.92
IRX4P78413 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
IRX4P78413 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC20.79■□□□□ 0.92
IRX4P78413 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC20.79■□□□□ 0.92
IRX4P78413 PBX1-209ENST00000485769 834 ntTSL 2 BASIC20.79■□□□□ 0.92
IRX4P78413 AL359736.2-201ENST00000621992 437 ntBASIC20.79■□□□□ 0.92
IRX4P78413 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC20.79■□□□□ 0.92
IRX4P78413 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC20.79■□□□□ 0.92
IRX4P78413 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
IRX4P78413 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
IRX4P78413 NARF-205ENST00000412079 1760 ntTSL 5 BASIC20.79■□□□□ 0.92
IRX4P78413 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
IRX4P78413 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC20.79■□□□□ 0.92
IRX4P78413 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
IRX4P78413 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
IRX4P78413 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC20.78■□□□□ 0.92
IRX4P78413 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
IRX4P78413 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
IRX4P78413 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC20.78■□□□□ 0.92
IRX4P78413 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC20.78■□□□□ 0.92
IRX4P78413 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
IRX4P78413 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
IRX4P78413 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
IRX4P78413 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
IRX4P78413 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC20.78■□□□□ 0.92
IRX4P78413 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC20.78■□□□□ 0.92
IRX4P78413 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
IRX4P78413 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
IRX4P78413 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
IRX4P78413 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
IRX4P78413 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC20.78■□□□□ 0.92
IRX4P78413 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
IRX4P78413 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
IRX4P78413 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
IRX4P78413 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC20.78■□□□□ 0.92
IRX4P78413 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC20.78■□□□□ 0.92
IRX4P78413 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
IRX4P78413 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC20.77■□□□□ 0.92
IRX4P78413 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
IRX4P78413 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
IRX4P78413 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
IRX4P78413 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
IRX4P78413 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC20.77■□□□□ 0.92
IRX4P78413 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
IRX4P78413 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
IRX4P78413 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
IRX4P78413 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC20.77■□□□□ 0.92
IRX4P78413 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
IRX4P78413 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC20.77■□□□□ 0.92
IRX4P78413 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
IRX4P78413 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
IRX4P78413 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
IRX4P78413 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC20.77■□□□□ 0.92
IRX4P78413 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC20.77■□□□□ 0.92
IRX4P78413 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC20.77■□□□□ 0.92
IRX4P78413 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC20.77■□□□□ 0.92
IRX4P78413 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
IRX4P78413 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
IRX4P78413 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
IRX4P78413 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC20.77■□□□□ 0.92
IRX4P78413 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
IRX4P78413 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
IRX4P78413 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
IRX4P78413 KRT16P2-201ENST00000414673 1423 ntBASIC20.77■□□□□ 0.91
IRX4P78413 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
IRX4P78413 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
IRX4P78413 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
IRX4P78413 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
IRX4P78413 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
IRX4P78413 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC20.76■□□□□ 0.91
IRX4P78413 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
IRX4P78413 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC20.76■□□□□ 0.91
IRX4P78413 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
IRX4P78413 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
IRX4P78413 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC20.76■□□□□ 0.91
IRX4P78413 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC20.76■□□□□ 0.91
IRX4P78413 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
IRX4P78413 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 19.1 ms