Protein–RNA interactions for Protein: P69849

NOMO3, Nodal modulator 3, humanhuman

Predictions only

Length 1,222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NOMO3P69849 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC21.23■□□□□ 0.99
NOMO3P69849 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
NOMO3P69849 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC21.22■□□□□ 0.99
NOMO3P69849 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
NOMO3P69849 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
NOMO3P69849 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
NOMO3P69849 MIPEPP3-201ENST00000412105 444 ntBASIC21.22■□□□□ 0.99
NOMO3P69849 MAP2K4P1-201ENST00000438453 1195 ntBASIC21.22■□□□□ 0.99
NOMO3P69849 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
NOMO3P69849 WT1-AS_3.1-201ENST00000613262 234 ntBASIC21.22■□□□□ 0.99
NOMO3P69849 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
NOMO3P69849 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
NOMO3P69849 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
NOMO3P69849 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
NOMO3P69849 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
NOMO3P69849 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
NOMO3P69849 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
NOMO3P69849 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
NOMO3P69849 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC21.21■□□□□ 0.99
NOMO3P69849 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
NOMO3P69849 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC21.21■□□□□ 0.99
NOMO3P69849 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC21.21■□□□□ 0.99
NOMO3P69849 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC21.21■□□□□ 0.99
NOMO3P69849 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC21.21■□□□□ 0.99
NOMO3P69849 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC21.21■□□□□ 0.99
NOMO3P69849 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
NOMO3P69849 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
NOMO3P69849 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
NOMO3P69849 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC21.21■□□□□ 0.99
NOMO3P69849 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
NOMO3P69849 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
NOMO3P69849 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
NOMO3P69849 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
NOMO3P69849 KRT8P20-201ENST00000423953 1409 ntBASIC21.21■□□□□ 0.99
NOMO3P69849 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.99
NOMO3P69849 LBX2-AS1-202ENST00000603175 2083 ntBASIC21.2■□□□□ 0.99
NOMO3P69849 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
NOMO3P69849 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC21.2■□□□□ 0.98
NOMO3P69849 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
NOMO3P69849 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
NOMO3P69849 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
NOMO3P69849 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
NOMO3P69849 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
NOMO3P69849 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC21.2■□□□□ 0.98
NOMO3P69849 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC21.2■□□□□ 0.98
NOMO3P69849 GPX1P1-201ENST00000388829 606 ntBASIC21.2■□□□□ 0.98
NOMO3P69849 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC21.2■□□□□ 0.98
NOMO3P69849 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
NOMO3P69849 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
NOMO3P69849 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
NOMO3P69849 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
NOMO3P69849 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
NOMO3P69849 MOK-225ENST00000522867 1883 ntTSL 5 BASIC21.2■□□□□ 0.98
NOMO3P69849 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
NOMO3P69849 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC21.19■□□□□ 0.98
NOMO3P69849 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC21.19■□□□□ 0.98
NOMO3P69849 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
NOMO3P69849 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
NOMO3P69849 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
NOMO3P69849 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC21.19■□□□□ 0.98
NOMO3P69849 TSPY6P-201ENST00000448518 926 ntBASIC21.19■□□□□ 0.98
NOMO3P69849 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC21.19■□□□□ 0.98
NOMO3P69849 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC21.19■□□□□ 0.98
NOMO3P69849 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC21.19■□□□□ 0.98
NOMO3P69849 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
NOMO3P69849 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
NOMO3P69849 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
NOMO3P69849 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
NOMO3P69849 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
NOMO3P69849 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
NOMO3P69849 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC21.18■□□□□ 0.98
NOMO3P69849 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
NOMO3P69849 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC21.18■□□□□ 0.98
NOMO3P69849 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
NOMO3P69849 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
NOMO3P69849 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC21.18■□□□□ 0.98
NOMO3P69849 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
NOMO3P69849 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC21.18■□□□□ 0.98
NOMO3P69849 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
NOMO3P69849 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC21.18■□□□□ 0.98
NOMO3P69849 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
NOMO3P69849 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
NOMO3P69849 AC023632.3-201ENST00000521633 145 ntBASIC21.18■□□□□ 0.98
NOMO3P69849 TK2-208ENST00000545043 1120 ntTSL 2 BASIC21.18■□□□□ 0.98
NOMO3P69849 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC21.18■□□□□ 0.98
NOMO3P69849 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC21.18■□□□□ 0.98
NOMO3P69849 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC21.18■□□□□ 0.98
NOMO3P69849 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
NOMO3P69849 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
NOMO3P69849 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
NOMO3P69849 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
NOMO3P69849 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC21.18■□□□□ 0.98
NOMO3P69849 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
NOMO3P69849 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
NOMO3P69849 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
NOMO3P69849 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC21.17■□□□□ 0.98
NOMO3P69849 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
NOMO3P69849 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
NOMO3P69849 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
NOMO3P69849 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC21.17■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms