Protein–RNA interactions for Protein: P63173

RPL38, 60S ribosomal protein L38, humanhuman

Known RBP Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL38P63173 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
RPL38P63173 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC19.32■□□□□ 0.68
RPL38P63173 AL591742.1-201ENST00000604433 565 ntBASIC19.32■□□□□ 0.68
RPL38P63173 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RPL38P63173 CYP21A1P-202ENST00000354927 1481 ntBASIC19.32■□□□□ 0.68
RPL38P63173 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
RPL38P63173 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC19.32■□□□□ 0.68
RPL38P63173 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
RPL38P63173 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RPL38P63173 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
RPL38P63173 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
RPL38P63173 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
RPL38P63173 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
RPL38P63173 STK25-205ENST00000405883 1904 ntTSL 2 BASIC19.31■□□□□ 0.68
RPL38P63173 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RPL38P63173 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RPL38P63173 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC19.31■□□□□ 0.68
RPL38P63173 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC19.31■□□□□ 0.68
RPL38P63173 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC19.31■□□□□ 0.68
RPL38P63173 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
RPL38P63173 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
RPL38P63173 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC19.31■□□□□ 0.68
RPL38P63173 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RPL38P63173 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
RPL38P63173 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RPL38P63173 STX7-201ENST00000367937 1090 ntTSL 5 BASIC19.31■□□□□ 0.68
RPL38P63173 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
RPL38P63173 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC19.31■□□□□ 0.68
RPL38P63173 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
RPL38P63173 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RPL38P63173 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RPL38P63173 H19-201ENST00000411754 1788 ntTSL 5 BASIC19.31■□□□□ 0.68
RPL38P63173 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RPL38P63173 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
RPL38P63173 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
RPL38P63173 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RPL38P63173 AL158211.5-201ENST00000623583 2518 ntBASIC19.3■□□□□ 0.68
RPL38P63173 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RPL38P63173 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
RPL38P63173 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC19.3■□□□□ 0.68
RPL38P63173 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RPL38P63173 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC19.3■□□□□ 0.68
RPL38P63173 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC19.3■□□□□ 0.68
RPL38P63173 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
RPL38P63173 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
RPL38P63173 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RPL38P63173 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC19.3■□□□□ 0.68
RPL38P63173 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC19.3■□□□□ 0.68
RPL38P63173 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC19.3■□□□□ 0.68
RPL38P63173 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
RPL38P63173 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC19.3■□□□□ 0.68
RPL38P63173 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
RPL38P63173 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC19.29■□□□□ 0.68
RPL38P63173 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC19.29■□□□□ 0.68
RPL38P63173 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
RPL38P63173 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RPL38P63173 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RPL38P63173 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
RPL38P63173 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
RPL38P63173 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
RPL38P63173 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC19.29■□□□□ 0.68
RPL38P63173 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC19.29■□□□□ 0.68
RPL38P63173 SPI1-203ENST00000533030 661 ntTSL 2 BASIC19.29■□□□□ 0.68
RPL38P63173 PLD4-205ENST00000553861 667 ntTSL 2 BASIC19.29■□□□□ 0.68
RPL38P63173 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
RPL38P63173 AC016405.3-201ENST00000607710 860 ntBASIC19.29■□□□□ 0.68
RPL38P63173 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RPL38P63173 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
RPL38P63173 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
RPL38P63173 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RPL38P63173 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RPL38P63173 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
RPL38P63173 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
RPL38P63173 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
RPL38P63173 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
RPL38P63173 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC19.28■□□□□ 0.68
RPL38P63173 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
RPL38P63173 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC19.28■□□□□ 0.68
RPL38P63173 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
RPL38P63173 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC19.28■□□□□ 0.68
RPL38P63173 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC19.28■□□□□ 0.68
RPL38P63173 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RPL38P63173 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
RPL38P63173 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
RPL38P63173 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC19.28■□□□□ 0.68
RPL38P63173 AC013268.1-206ENST00000638368 961 ntBASIC19.28■□□□□ 0.68
RPL38P63173 AC112229.1-201ENST00000639295 961 ntBASIC19.28■□□□□ 0.68
RPL38P63173 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
RPL38P63173 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC19.28■□□□□ 0.68
RPL38P63173 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC19.28■□□□□ 0.68
RPL38P63173 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
RPL38P63173 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
RPL38P63173 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC19.27■□□□□ 0.68
RPL38P63173 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC19.27■□□□□ 0.68
RPL38P63173 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
RPL38P63173 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
RPL38P63173 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC19.27■□□□□ 0.68
RPL38P63173 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
RPL38P63173 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC19.27■□□□□ 0.68
RPL38P63173 KRT18P11-201ENST00000435214 1283 ntBASIC19.27■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 19.6 ms