Protein–RNA interactions for Protein: P61966

AP1S1, AP-1 complex subunit sigma-1A, humanhuman

Predictions only

Length 158 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S1P61966 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC20.22■□□□□ 0.83
AP1S1P61966 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
AP1S1P61966 AL162377.1-201ENST00000618844 1793 ntBASIC20.22■□□□□ 0.83
AP1S1P61966 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
AP1S1P61966 ESRRAP1-201ENST00000400596 1257 ntBASIC20.22■□□□□ 0.83
AP1S1P61966 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
AP1S1P61966 MMAB-206ENST00000540016 945 ntTSL 3 BASIC20.22■□□□□ 0.83
AP1S1P61966 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC20.22■□□□□ 0.83
AP1S1P61966 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC20.22■□□□□ 0.83
AP1S1P61966 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
AP1S1P61966 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC20.22■□□□□ 0.83
AP1S1P61966 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC20.22■□□□□ 0.83
AP1S1P61966 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
AP1S1P61966 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC20.22■□□□□ 0.83
AP1S1P61966 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC20.22■□□□□ 0.83
AP1S1P61966 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
AP1S1P61966 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC20.22■□□□□ 0.83
AP1S1P61966 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
AP1S1P61966 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
AP1S1P61966 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
AP1S1P61966 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC20.21■□□□□ 0.83
AP1S1P61966 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC20.21■□□□□ 0.83
AP1S1P61966 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
AP1S1P61966 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC20.21■□□□□ 0.83
AP1S1P61966 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC20.21■□□□□ 0.83
AP1S1P61966 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
AP1S1P61966 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
AP1S1P61966 KRT16P6-202ENST00000425692 1426 ntBASIC20.21■□□□□ 0.83
AP1S1P61966 AL512408.1-201ENST00000569378 2000 ntBASIC20.21■□□□□ 0.83
AP1S1P61966 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
AP1S1P61966 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
AP1S1P61966 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
AP1S1P61966 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
AP1S1P61966 HES2-206ENST00000489730 730 ntTSL 2 BASIC20.21■□□□□ 0.83
AP1S1P61966 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC20.21■□□□□ 0.83
AP1S1P61966 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC20.21■□□□□ 0.83
AP1S1P61966 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
AP1S1P61966 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC20.21■□□□□ 0.83
AP1S1P61966 AC008687.6-201ENST00000596318 630 ntBASIC20.21■□□□□ 0.83
AP1S1P61966 AC008403.3-201ENST00000598924 454 ntBASIC20.21■□□□□ 0.83
AP1S1P61966 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC20.21■□□□□ 0.83
AP1S1P61966 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
AP1S1P61966 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
AP1S1P61966 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
AP1S1P61966 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
AP1S1P61966 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC20.21■□□□□ 0.83
AP1S1P61966 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC20.21■□□□□ 0.83
AP1S1P61966 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
AP1S1P61966 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
AP1S1P61966 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.83
AP1S1P61966 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC20.2■□□□□ 0.83
AP1S1P61966 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
AP1S1P61966 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
AP1S1P61966 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
AP1S1P61966 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC20.2■□□□□ 0.82
AP1S1P61966 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC20.2■□□□□ 0.82
AP1S1P61966 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
AP1S1P61966 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
AP1S1P61966 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
AP1S1P61966 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC20.2■□□□□ 0.82
AP1S1P61966 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
AP1S1P61966 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
AP1S1P61966 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
AP1S1P61966 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC20.2■□□□□ 0.82
AP1S1P61966 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC20.2■□□□□ 0.82
AP1S1P61966 POU5F1P3-201ENST00000428824 1078 ntBASIC20.2■□□□□ 0.82
AP1S1P61966 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC20.2■□□□□ 0.82
AP1S1P61966 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC20.2■□□□□ 0.82
AP1S1P61966 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
AP1S1P61966 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC20.2■□□□□ 0.82
AP1S1P61966 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
AP1S1P61966 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
AP1S1P61966 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
AP1S1P61966 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC20.2■□□□□ 0.82
AP1S1P61966 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC20.2■□□□□ 0.82
AP1S1P61966 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
AP1S1P61966 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC20.2■□□□□ 0.82
AP1S1P61966 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
AP1S1P61966 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
AP1S1P61966 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
AP1S1P61966 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
AP1S1P61966 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
AP1S1P61966 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC20.19■□□□□ 0.82
AP1S1P61966 LINC01006-201ENST00000333319 2292 ntBASIC20.19■□□□□ 0.82
AP1S1P61966 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC20.19■□□□□ 0.82
AP1S1P61966 AC092667.1-201ENST00000434301 2586 ntBASIC20.19■□□□□ 0.82
AP1S1P61966 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
AP1S1P61966 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
AP1S1P61966 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
AP1S1P61966 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC20.19■□□□□ 0.82
AP1S1P61966 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC20.19■□□□□ 0.82
AP1S1P61966 ADM-205ENST00000528544 586 ntTSL 2 BASIC20.19■□□□□ 0.82
AP1S1P61966 KLF2-202ENST00000592003 564 ntTSL 3 BASIC20.19■□□□□ 0.82
AP1S1P61966 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
AP1S1P61966 AC120498.8-201ENST00000614275 531 ntBASIC20.19■□□□□ 0.82
AP1S1P61966 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
AP1S1P61966 AL157384.1-201ENST00000445995 2473 ntBASIC20.19■□□□□ 0.82
AP1S1P61966 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
AP1S1P61966 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC20.19■□□□□ 0.82
AP1S1P61966 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms