Protein–RNA interactions for Protein: P61073

CXCR4, C-X-C chemokine receptor type 4, humanhuman

Predictions only

Length 352 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4P61073 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
CXCR4P61073 AP001330.3-201ENST00000520123 633 ntBASIC18.28■□□□□ 0.52
CXCR4P61073 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC18.28■□□□□ 0.52
CXCR4P61073 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CXCR4P61073 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CXCR4P61073 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC18.28■□□□□ 0.52
CXCR4P61073 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CXCR4P61073 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
CXCR4P61073 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CXCR4P61073 MFF-207ENST00000409565 1548 ntTSL 2 BASIC18.28■□□□□ 0.52
CXCR4P61073 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CXCR4P61073 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CXCR4P61073 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CXCR4P61073 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CXCR4P61073 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC18.27■□□□□ 0.52
CXCR4P61073 AC106739.1-201ENST00000617035 715 ntBASIC18.27■□□□□ 0.52
CXCR4P61073 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CXCR4P61073 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CXCR4P61073 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CXCR4P61073 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CXCR4P61073 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
CXCR4P61073 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.51
CXCR4P61073 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
CXCR4P61073 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
CXCR4P61073 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC18.27■□□□□ 0.51
CXCR4P61073 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC18.27■□□□□ 0.51
CXCR4P61073 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC18.27■□□□□ 0.51
CXCR4P61073 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CXCR4P61073 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
CXCR4P61073 AC005082.1-201ENST00000413042 2259 ntBASIC18.26■□□□□ 0.51
CXCR4P61073 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
CXCR4P61073 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
CXCR4P61073 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC18.26■□□□□ 0.51
CXCR4P61073 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC18.26■□□□□ 0.51
CXCR4P61073 EDA-201ENST00000338901 1233 ntBASIC18.26■□□□□ 0.51
CXCR4P61073 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CXCR4P61073 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC18.26■□□□□ 0.51
CXCR4P61073 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CXCR4P61073 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CXCR4P61073 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CXCR4P61073 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
CXCR4P61073 AC008406.3-201ENST00000620001 1374 ntBASIC18.26■□□□□ 0.51
CXCR4P61073 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CXCR4P61073 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CXCR4P61073 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
CXCR4P61073 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
CXCR4P61073 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC18.25■□□□□ 0.51
CXCR4P61073 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CXCR4P61073 MPST-204ENST00000404393 1329 ntTSL 5 BASIC18.25■□□□□ 0.51
CXCR4P61073 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC18.25■□□□□ 0.51
CXCR4P61073 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CXCR4P61073 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
CXCR4P61073 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC18.25■□□□□ 0.51
CXCR4P61073 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CXCR4P61073 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC18.25■□□□□ 0.51
CXCR4P61073 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CXCR4P61073 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CXCR4P61073 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC18.25■□□□□ 0.51
CXCR4P61073 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC18.25■□□□□ 0.51
CXCR4P61073 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC18.25■□□□□ 0.51
CXCR4P61073 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CXCR4P61073 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CXCR4P61073 RASA4CP-201ENST00000424092 1398 ntBASIC18.25■□□□□ 0.51
CXCR4P61073 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CXCR4P61073 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
CXCR4P61073 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
CXCR4P61073 PWWP2AP1-201ENST00000429776 2273 ntBASIC18.25■□□□□ 0.51
CXCR4P61073 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC18.25■□□□□ 0.51
CXCR4P61073 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CXCR4P61073 LINC01465-201ENST00000408887 1940 ntBASIC18.25■□□□□ 0.51
CXCR4P61073 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
CXCR4P61073 DPP3P2-201ENST00000416030 1696 ntBASIC18.25■□□□□ 0.51
CXCR4P61073 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC18.25■□□□□ 0.51
CXCR4P61073 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC18.24■□□□□ 0.51
CXCR4P61073 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
CXCR4P61073 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC18.24■□□□□ 0.51
CXCR4P61073 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC18.24■□□□□ 0.51
CXCR4P61073 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CXCR4P61073 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CXCR4P61073 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
CXCR4P61073 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
CXCR4P61073 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
CXCR4P61073 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC18.24■□□□□ 0.51
CXCR4P61073 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC18.24■□□□□ 0.51
CXCR4P61073 RARRES2P11-201ENST00000635158 484 ntBASIC18.24■□□□□ 0.51
CXCR4P61073 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CXCR4P61073 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC18.24■□□□□ 0.51
CXCR4P61073 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CXCR4P61073 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CXCR4P61073 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CXCR4P61073 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CXCR4P61073 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
CXCR4P61073 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CXCR4P61073 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC18.24■□□□□ 0.51
CXCR4P61073 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CXCR4P61073 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CXCR4P61073 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC18.23■□□□□ 0.51
CXCR4P61073 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CXCR4P61073 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CXCR4P61073 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 20.2 ms