Protein–RNA interactions for Protein: P59780

AP3S2, AP-3 complex subunit sigma-2, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S2P59780 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC17.23■□□□□ 0.35
AP3S2P59780 AC009237.3-201ENST00000393279 1427 ntBASIC17.23■□□□□ 0.35
AP3S2P59780 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
AP3S2P59780 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC17.23■□□□□ 0.35
AP3S2P59780 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC17.23■□□□□ 0.35
AP3S2P59780 PRTG-204ENST00000561292 833 ntTSL 3 BASIC17.23■□□□□ 0.35
AP3S2P59780 MIR6724-1-201ENST00000616420 92 ntBASIC17.23■□□□□ 0.35
AP3S2P59780 MIR6724-2-201ENST00000616483 92 ntBASIC17.23■□□□□ 0.35
AP3S2P59780 MIR6724-4-201ENST00000617390 92 ntBASIC17.23■□□□□ 0.35
AP3S2P59780 MIR6724-3-201ENST00000622482 92 ntBASIC17.23■□□□□ 0.35
AP3S2P59780 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC17.23■□□□□ 0.35
AP3S2P59780 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
AP3S2P59780 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
AP3S2P59780 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
AP3S2P59780 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
AP3S2P59780 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC17.23■□□□□ 0.35
AP3S2P59780 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
AP3S2P59780 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
AP3S2P59780 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
AP3S2P59780 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
AP3S2P59780 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
AP3S2P59780 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
AP3S2P59780 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
AP3S2P59780 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
AP3S2P59780 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC17.22■□□□□ 0.35
AP3S2P59780 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
AP3S2P59780 TSPY9P-201ENST00000440215 945 ntBASIC17.22■□□□□ 0.35
AP3S2P59780 TSPY11P-201ENST00000442607 1045 ntBASIC17.22■□□□□ 0.35
AP3S2P59780 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
AP3S2P59780 RNF146-206ENST00000480444 843 ntTSL 2 BASIC17.22■□□□□ 0.35
AP3S2P59780 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
AP3S2P59780 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
AP3S2P59780 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
AP3S2P59780 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
AP3S2P59780 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC17.22■□□□□ 0.35
AP3S2P59780 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC17.22■□□□□ 0.35
AP3S2P59780 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
AP3S2P59780 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
AP3S2P59780 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC17.21■□□□□ 0.35
AP3S2P59780 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC17.21■□□□□ 0.35
AP3S2P59780 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC17.21■□□□□ 0.35
AP3S2P59780 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
AP3S2P59780 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
AP3S2P59780 AC005082.1-201ENST00000413042 2259 ntBASIC17.21■□□□□ 0.35
AP3S2P59780 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
AP3S2P59780 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC17.21■□□□□ 0.35
AP3S2P59780 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC17.21■□□□□ 0.35
AP3S2P59780 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
AP3S2P59780 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
AP3S2P59780 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
AP3S2P59780 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
AP3S2P59780 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
AP3S2P59780 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
AP3S2P59780 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
AP3S2P59780 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
AP3S2P59780 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
AP3S2P59780 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC17.21■□□□□ 0.34
AP3S2P59780 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
AP3S2P59780 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC17.21■□□□□ 0.34
AP3S2P59780 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
AP3S2P59780 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
AP3S2P59780 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC17.21■□□□□ 0.34
AP3S2P59780 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.34
AP3S2P59780 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
AP3S2P59780 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC17.2■□□□□ 0.34
AP3S2P59780 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
AP3S2P59780 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
AP3S2P59780 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
AP3S2P59780 AC079598.2-202ENST00000546624 1451 ntBASIC17.2■□□□□ 0.34
AP3S2P59780 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
AP3S2P59780 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC17.2■□□□□ 0.34
AP3S2P59780 SMUG1P1-201ENST00000590640 811 ntBASIC17.2■□□□□ 0.34
AP3S2P59780 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
AP3S2P59780 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
AP3S2P59780 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
AP3S2P59780 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
AP3S2P59780 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
AP3S2P59780 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
AP3S2P59780 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
AP3S2P59780 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
AP3S2P59780 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
AP3S2P59780 PTGES2-AS1-201ENST00000443493 2100 ntBASIC17.2■□□□□ 0.34
AP3S2P59780 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
AP3S2P59780 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
AP3S2P59780 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
AP3S2P59780 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
AP3S2P59780 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
AP3S2P59780 AL138781.2-201ENST00000617896 1843 ntBASIC17.19■□□□□ 0.34
AP3S2P59780 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
AP3S2P59780 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
AP3S2P59780 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
AP3S2P59780 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC17.19■□□□□ 0.34
AP3S2P59780 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC17.19■□□□□ 0.34
AP3S2P59780 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
AP3S2P59780 AK3-203ENST00000447596 705 ntTSL 2 BASIC17.19■□□□□ 0.34
AP3S2P59780 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
AP3S2P59780 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
AP3S2P59780 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC17.19■□□□□ 0.34
AP3S2P59780 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
AP3S2P59780 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC17.19■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms