Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
CDH13P55290 AC087633.2-202ENST00000565166 1439 ntBASIC19.62■□□□□ 0.73
CDH13P55290 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
CDH13P55290 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC19.62■□□□□ 0.73
CDH13P55290 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC19.62■□□□□ 0.73
CDH13P55290 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
CDH13P55290 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CDH13P55290 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
CDH13P55290 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC19.62■□□□□ 0.73
CDH13P55290 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC19.62■□□□□ 0.73
CDH13P55290 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
CDH13P55290 MIR6821-201ENST00000617625 74 ntBASIC19.62■□□□□ 0.73
CDH13P55290 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CDH13P55290 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CDH13P55290 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC19.62■□□□□ 0.73
CDH13P55290 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CDH13P55290 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
CDH13P55290 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CDH13P55290 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC19.62■□□□□ 0.73
CDH13P55290 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC19.61■□□□□ 0.73
CDH13P55290 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
CDH13P55290 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CDH13P55290 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CDH13P55290 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
CDH13P55290 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CDH13P55290 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC19.61■□□□□ 0.73
CDH13P55290 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC19.61■□□□□ 0.73
CDH13P55290 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CDH13P55290 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CDH13P55290 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CDH13P55290 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CDH13P55290 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC19.61■□□□□ 0.73
CDH13P55290 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC19.61■□□□□ 0.73
CDH13P55290 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC19.61■□□□□ 0.73
CDH13P55290 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC19.61■□□□□ 0.73
CDH13P55290 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CDH13P55290 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CDH13P55290 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CDH13P55290 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CDH13P55290 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC19.6■□□□□ 0.73
CDH13P55290 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
CDH13P55290 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
CDH13P55290 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC19.6■□□□□ 0.73
CDH13P55290 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
CDH13P55290 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CDH13P55290 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CDH13P55290 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
CDH13P55290 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CDH13P55290 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CDH13P55290 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
CDH13P55290 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
CDH13P55290 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
CDH13P55290 AC116562.4-201ENST00000641316 2276 ntBASIC19.59■□□□□ 0.73
CDH13P55290 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC19.59■□□□□ 0.73
CDH13P55290 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
CDH13P55290 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC19.59■□□□□ 0.73
CDH13P55290 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
CDH13P55290 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
CDH13P55290 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
CDH13P55290 PGM5P4-201ENST00000421970 445 ntBASIC19.59■□□□□ 0.73
CDH13P55290 AC137761.2-201ENST00000561729 223 ntBASIC19.59■□□□□ 0.73
CDH13P55290 AC145350.3-201ENST00000569033 163 ntBASIC19.59■□□□□ 0.73
CDH13P55290 PLLP-204ENST00000569059 665 ntTSL 3 BASIC19.59■□□□□ 0.73
CDH13P55290 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC19.59■□□□□ 0.73
CDH13P55290 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC19.59■□□□□ 0.73
CDH13P55290 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CDH13P55290 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC19.59■□□□□ 0.73
CDH13P55290 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
CDH13P55290 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC19.59■□□□□ 0.73
CDH13P55290 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CDH13P55290 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC19.59■□□□□ 0.73
CDH13P55290 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
CDH13P55290 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
CDH13P55290 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
CDH13P55290 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
CDH13P55290 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC19.58■□□□□ 0.73
CDH13P55290 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC19.58■□□□□ 0.73
CDH13P55290 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC19.58■□□□□ 0.73
CDH13P55290 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
CDH13P55290 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
CDH13P55290 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC19.58■□□□□ 0.73
CDH13P55290 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.72
CDH13P55290 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC19.58■□□□□ 0.72
CDH13P55290 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC19.58■□□□□ 0.72
CDH13P55290 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC19.58■□□□□ 0.72
CDH13P55290 AC013268.1-206ENST00000638368 961 ntBASIC19.58■□□□□ 0.72
CDH13P55290 AC112229.1-201ENST00000639295 961 ntBASIC19.58■□□□□ 0.72
CDH13P55290 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
CDH13P55290 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC19.58■□□□□ 0.72
CDH13P55290 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC19.58■□□□□ 0.72
CDH13P55290 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CDH13P55290 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CDH13P55290 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC19.57■□□□□ 0.72
CDH13P55290 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CDH13P55290 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC19.57■□□□□ 0.72
CDH13P55290 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CDH13P55290 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CDH13P55290 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC19.57■□□□□ 0.72
CDH13P55290 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
CDH13P55290 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms