Protein–RNA interactions for Protein: P55036

PSMD4, 26S proteasome non-ATPase regulatory subunit 4, humanhuman

Known RBP Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD4P55036 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
PSMD4P55036 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC18.66■□□□□ 0.58
PSMD4P55036 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PSMD4P55036 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PSMD4P55036 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
PSMD4P55036 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PSMD4P55036 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PSMD4P55036 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC18.66■□□□□ 0.58
PSMD4P55036 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC18.66■□□□□ 0.58
PSMD4P55036 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
PSMD4P55036 WT1-AS_3.1-201ENST00000613262 234 ntBASIC18.66■□□□□ 0.58
PSMD4P55036 PFKL-212ENST00000628044 129 ntTSL 3 BASIC18.66■□□□□ 0.58
PSMD4P55036 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
PSMD4P55036 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC18.66■□□□□ 0.58
PSMD4P55036 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
PSMD4P55036 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC18.66■□□□□ 0.58
PSMD4P55036 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
PSMD4P55036 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
PSMD4P55036 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
PSMD4P55036 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
PSMD4P55036 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
PSMD4P55036 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
PSMD4P55036 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PSMD4P55036 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PSMD4P55036 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
PSMD4P55036 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
PSMD4P55036 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PSMD4P55036 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PSMD4P55036 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PSMD4P55036 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PSMD4P55036 STK25-205ENST00000405883 1904 ntTSL 2 BASIC18.65■□□□□ 0.58
PSMD4P55036 TSPY6P-201ENST00000448518 926 ntBASIC18.65■□□□□ 0.58
PSMD4P55036 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
PSMD4P55036 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC18.65■□□□□ 0.58
PSMD4P55036 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC18.65■□□□□ 0.58
PSMD4P55036 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC18.65■□□□□ 0.58
PSMD4P55036 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC18.65■□□□□ 0.58
PSMD4P55036 MARS-234ENST00000630571 216 ntTSL 5 BASIC18.65■□□□□ 0.58
PSMD4P55036 MARS-235ENST00000630803 183 ntTSL 3 BASIC18.65■□□□□ 0.58
PSMD4P55036 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
PSMD4P55036 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC18.65■□□□□ 0.58
PSMD4P55036 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
PSMD4P55036 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
PSMD4P55036 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC18.65■□□□□ 0.58
PSMD4P55036 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC18.65■□□□□ 0.58
PSMD4P55036 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC18.65■□□□□ 0.58
PSMD4P55036 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
PSMD4P55036 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC18.65■□□□□ 0.58
PSMD4P55036 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
PSMD4P55036 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
PSMD4P55036 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC18.64■□□□□ 0.58
PSMD4P55036 KRT17P1-201ENST00000399211 1546 ntBASIC18.64■□□□□ 0.58
PSMD4P55036 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC18.64■□□□□ 0.58
PSMD4P55036 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
PSMD4P55036 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC18.64■□□□□ 0.57
PSMD4P55036 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
PSMD4P55036 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
PSMD4P55036 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC18.64■□□□□ 0.57
PSMD4P55036 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PSMD4P55036 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
PSMD4P55036 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
PSMD4P55036 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC18.64■□□□□ 0.57
PSMD4P55036 MIPEPP3-201ENST00000412105 444 ntBASIC18.64■□□□□ 0.57
PSMD4P55036 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC18.64■□□□□ 0.57
PSMD4P55036 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
PSMD4P55036 MIR4758-201ENST00000577688 71 ntBASIC18.64■□□□□ 0.57
PSMD4P55036 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
PSMD4P55036 GXYLT1P5-201ENST00000614548 1189 ntBASIC18.64■□□□□ 0.57
PSMD4P55036 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
PSMD4P55036 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PSMD4P55036 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC18.64■□□□□ 0.57
PSMD4P55036 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PSMD4P55036 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PSMD4P55036 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC18.64■□□□□ 0.57
PSMD4P55036 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PSMD4P55036 AL512408.1-201ENST00000569378 2000 ntBASIC18.64■□□□□ 0.57
PSMD4P55036 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PSMD4P55036 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
PSMD4P55036 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
PSMD4P55036 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC18.64■□□□□ 0.57
PSMD4P55036 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC18.63■□□□□ 0.57
PSMD4P55036 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
PSMD4P55036 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PSMD4P55036 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC18.63■□□□□ 0.57
PSMD4P55036 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PSMD4P55036 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
PSMD4P55036 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC18.63■□□□□ 0.57
PSMD4P55036 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PSMD4P55036 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PSMD4P55036 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
PSMD4P55036 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC18.63■□□□□ 0.57
PSMD4P55036 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PSMD4P55036 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
PSMD4P55036 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC18.63■□□□□ 0.57
PSMD4P55036 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
PSMD4P55036 MAP2K4P1-201ENST00000438453 1195 ntBASIC18.63■□□□□ 0.57
PSMD4P55036 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC18.63■□□□□ 0.57
PSMD4P55036 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC18.63■□□□□ 0.57
PSMD4P55036 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
PSMD4P55036 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC18.63■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms