Protein–RNA interactions for Protein: P54278

PMS2, Mismatch repair endonuclease PMS2, humanhuman

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMS2P54278 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
PMS2P54278 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
PMS2P54278 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC20.68■□□□□ 0.9
PMS2P54278 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC20.68■□□□□ 0.9
PMS2P54278 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC20.68■□□□□ 0.9
PMS2P54278 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
PMS2P54278 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
PMS2P54278 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PMS2P54278 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
PMS2P54278 AC245052.3-201ENST00000450182 901 ntBASIC20.68■□□□□ 0.9
PMS2P54278 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC20.68■□□□□ 0.9
PMS2P54278 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PMS2P54278 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
PMS2P54278 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PMS2P54278 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PMS2P54278 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PMS2P54278 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC20.68■□□□□ 0.9
PMS2P54278 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC20.68■□□□□ 0.9
PMS2P54278 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PMS2P54278 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
PMS2P54278 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC20.68■□□□□ 0.9
PMS2P54278 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PMS2P54278 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC20.68■□□□□ 0.9
PMS2P54278 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC20.67■□□□□ 0.9
PMS2P54278 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
PMS2P54278 AC116050.2-201ENST00000612102 1779 ntBASIC20.67■□□□□ 0.9
PMS2P54278 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
PMS2P54278 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
PMS2P54278 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC20.67■□□□□ 0.9
PMS2P54278 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC20.67■□□□□ 0.9
PMS2P54278 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC20.67■□□□□ 0.9
PMS2P54278 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
PMS2P54278 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PMS2P54278 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC20.67■□□□□ 0.9
PMS2P54278 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PMS2P54278 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
PMS2P54278 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC20.67■□□□□ 0.9
PMS2P54278 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
PMS2P54278 AC093484.2-201ENST00000580996 2166 ntBASIC20.66■□□□□ 0.9
PMS2P54278 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC20.66■□□□□ 0.9
PMS2P54278 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC20.66■□□□□ 0.9
PMS2P54278 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
PMS2P54278 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
PMS2P54278 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
PMS2P54278 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC20.66■□□□□ 0.9
PMS2P54278 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC20.66■□□□□ 0.9
PMS2P54278 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC20.66■□□□□ 0.9
PMS2P54278 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
PMS2P54278 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
PMS2P54278 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC20.66■□□□□ 0.9
PMS2P54278 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
PMS2P54278 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC20.66■□□□□ 0.9
PMS2P54278 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
PMS2P54278 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC20.66■□□□□ 0.9
PMS2P54278 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
PMS2P54278 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PMS2P54278 DPP3P2-201ENST00000416030 1696 ntBASIC20.66■□□□□ 0.9
PMS2P54278 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PMS2P54278 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
PMS2P54278 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
PMS2P54278 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
PMS2P54278 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PMS2P54278 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC20.66■□□□□ 0.9
PMS2P54278 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PMS2P54278 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC20.65■□□□□ 0.9
PMS2P54278 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
PMS2P54278 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
PMS2P54278 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
PMS2P54278 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
PMS2P54278 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PMS2P54278 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PMS2P54278 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC20.65■□□□□ 0.9
PMS2P54278 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC20.65■□□□□ 0.9
PMS2P54278 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC20.65■□□□□ 0.9
PMS2P54278 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC20.65■□□□□ 0.9
PMS2P54278 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
PMS2P54278 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC20.65■□□□□ 0.9
PMS2P54278 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
PMS2P54278 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PMS2P54278 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PMS2P54278 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC20.65■□□□□ 0.9
PMS2P54278 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC20.64■□□□□ 0.9
PMS2P54278 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
PMS2P54278 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
PMS2P54278 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
PMS2P54278 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
PMS2P54278 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
PMS2P54278 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
PMS2P54278 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC20.64■□□□□ 0.89
PMS2P54278 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
PMS2P54278 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
PMS2P54278 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC20.64■□□□□ 0.89
PMS2P54278 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
PMS2P54278 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
PMS2P54278 MPST-204ENST00000404393 1329 ntTSL 5 BASIC20.64■□□□□ 0.89
PMS2P54278 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
PMS2P54278 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
PMS2P54278 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
PMS2P54278 ID1-201ENST00000376105 1233 ntBASIC20.64■□□□□ 0.89
PMS2P54278 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC20.64■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 18.7 ms