Protein–RNA interactions for Protein: P54253

ATXN1, Ataxin-1, humanhuman

Known RBP Predictions only

Length 815 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN1P54253 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC21.09■□□□□ 0.97
ATXN1P54253 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
ATXN1P54253 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC21.09■□□□□ 0.97
ATXN1P54253 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC21.09■□□□□ 0.97
ATXN1P54253 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
ATXN1P54253 DPP3P2-201ENST00000416030 1696 ntBASIC21.09■□□□□ 0.97
ATXN1P54253 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.97
ATXN1P54253 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC21.08■□□□□ 0.97
ATXN1P54253 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
ATXN1P54253 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC21.08■□□□□ 0.97
ATXN1P54253 LINC01521-201ENST00000504184 1943 ntBASIC21.08■□□□□ 0.97
ATXN1P54253 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.97
ATXN1P54253 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
ATXN1P54253 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
ATXN1P54253 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
ATXN1P54253 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
ATXN1P54253 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
ATXN1P54253 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
ATXN1P54253 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC21.08■□□□□ 0.97
ATXN1P54253 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
ATXN1P54253 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC21.08■□□□□ 0.97
ATXN1P54253 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC21.08■□□□□ 0.97
ATXN1P54253 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
ATXN1P54253 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC21.08■□□□□ 0.97
ATXN1P54253 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.97
ATXN1P54253 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
ATXN1P54253 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC21.08■□□□□ 0.96
ATXN1P54253 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
ATXN1P54253 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC21.08■□□□□ 0.96
ATXN1P54253 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.96
ATXN1P54253 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
ATXN1P54253 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC21.07■□□□□ 0.96
ATXN1P54253 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC21.07■□□□□ 0.96
ATXN1P54253 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
ATXN1P54253 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC21.07■□□□□ 0.96
ATXN1P54253 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
ATXN1P54253 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
ATXN1P54253 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
ATXN1P54253 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC21.07■□□□□ 0.96
ATXN1P54253 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC21.07■□□□□ 0.96
ATXN1P54253 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
ATXN1P54253 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
ATXN1P54253 BET1L-207ENST00000529614 560 ntTSL 5 BASIC21.07■□□□□ 0.96
ATXN1P54253 AL359736.2-201ENST00000621992 437 ntBASIC21.07■□□□□ 0.96
ATXN1P54253 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC21.07■□□□□ 0.96
ATXN1P54253 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC21.07■□□□□ 0.96
ATXN1P54253 H19-201ENST00000411754 1788 ntTSL 5 BASIC21.07■□□□□ 0.96
ATXN1P54253 AC073130.3-201ENST00000624389 2278 ntBASIC21.07■□□□□ 0.96
ATXN1P54253 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC21.07■□□□□ 0.96
ATXN1P54253 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
ATXN1P54253 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
ATXN1P54253 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC21.06■□□□□ 0.96
ATXN1P54253 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
ATXN1P54253 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
ATXN1P54253 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
ATXN1P54253 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
ATXN1P54253 INO80E-214ENST00000620599 515 ntTSL 2 BASIC21.06■□□□□ 0.96
ATXN1P54253 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
ATXN1P54253 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
ATXN1P54253 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
ATXN1P54253 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC21.06■□□□□ 0.96
ATXN1P54253 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
ATXN1P54253 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
ATXN1P54253 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
ATXN1P54253 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
ATXN1P54253 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
ATXN1P54253 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
ATXN1P54253 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
ATXN1P54253 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC21.05■□□□□ 0.96
ATXN1P54253 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
ATXN1P54253 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
ATXN1P54253 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
ATXN1P54253 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
ATXN1P54253 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC21.05■□□□□ 0.96
ATXN1P54253 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC21.05■□□□□ 0.96
ATXN1P54253 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC21.05■□□□□ 0.96
ATXN1P54253 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC21.05■□□□□ 0.96
ATXN1P54253 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
ATXN1P54253 PCDHAC2-203ENST00000615316 3011 ntBASIC21.05■□□□□ 0.96
ATXN1P54253 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC21.05■□□□□ 0.96
ATXN1P54253 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
ATXN1P54253 AC112907.3-201ENST00000577781 2400 ntBASIC21.05■□□□□ 0.96
ATXN1P54253 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC21.05■□□□□ 0.96
ATXN1P54253 AL162377.1-201ENST00000618844 1793 ntBASIC21.05■□□□□ 0.96
ATXN1P54253 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
ATXN1P54253 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
ATXN1P54253 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC21.04■□□□□ 0.96
ATXN1P54253 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
ATXN1P54253 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC21.04■□□□□ 0.96
ATXN1P54253 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
ATXN1P54253 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
ATXN1P54253 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
ATXN1P54253 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
ATXN1P54253 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC21.04■□□□□ 0.96
ATXN1P54253 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
ATXN1P54253 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
ATXN1P54253 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC21.04■□□□□ 0.96
ATXN1P54253 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC21.04■□□□□ 0.96
ATXN1P54253 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC21.04■□□□□ 0.96
ATXN1P54253 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC21.04■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms