Protein–RNA interactions for Protein: P54000

SUB1, RNA polymerase II transcriptional coactivator SUB1, yeastyeast

Known RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SUB1P54000 YLR264C-AYLR264C-A 117 nt1.11□□□□□ -2.23
SUB1P54000 PTP2YOR208W 2253 nt1.1□□□□□ -2.23
SUB1P54000 YER079WYER079W 633 nt1.1□□□□□ -2.23
SUB1P54000 SWF1YDR126W 1011 nt1.09□□□□□ -2.23
SUB1P54000 YOR072W-AYOR072W-A 249 nt1.09□□□□□ -2.23
SUB1P54000 BUD3YCL014W 4911 nt1.09□□□□□ -2.23
SUB1P54000 DBP6YNR038W 1890 nt1.08□□□□□ -2.24
SUB1P54000 YHR052W-AYHR052W-A 195 nt1.08□□□□□ -2.24
SUB1P54000 YHR054W-AYHR054W-A 195 nt1.08□□□□□ -2.24
SUB1P54000 BSC3YLR465C 309 nt1.08□□□□□ -2.24
SUB1P54000 YOR282WYOR282W 321 nt1.08□□□□□ -2.24
SUB1P54000 YDR426CYDR426C 378 nt1.07□□□□□ -2.24
SUB1P54000 SPO75YLL005C 2607 nt1.07□□□□□ -2.24
SUB1P54000 YPR117WYPR117W 7470 nt1.07□□□□□ -2.24
SUB1P54000 SMC1YFL008W 3678 nt1.06□□□□□ -2.24
SUB1P54000 ALG13YGL047W 609 nt1.06□□□□□ -2.24
SUB1P54000 Q0144Q0144 330 nt1.06□□□□□ -2.24
SUB1P54000 PCC1YKR095W-A 267 nt1.06□□□□□ -2.24
SUB1P54000 VPS20YMR077C 666 nt1.06□□□□□ -2.24
SUB1P54000 YOL159C-AYOL159C-A 273 nt1.05□□□□□ -2.24
SUB1P54000 YBR206WYBR206W 324 nt1.05□□□□□ -2.24
SUB1P54000 YBR285WYBR285W 435 nt1.05□□□□□ -2.24
SUB1P54000 YJR157WYJR157W 363 nt1.04□□□□□ -2.24
SUB1P54000 YBR064WYBR064W 429 nt1.04□□□□□ -2.24
SUB1P54000 SIP4YJL089W 2490 nt1.04□□□□□ -2.24
SUB1P54000 NOP9YJL010C 2001 nt1.03□□□□□ -2.24
SUB1P54000 PMP1YCR024C-A 123 nt1.03□□□□□ -2.24
SUB1P54000 YHR138CYHR138C 345 nt1.03□□□□□ -2.24
SUB1P54000 YOR053WYOR053W 342 nt1.03□□□□□ -2.24
SUB1P54000 YCK3YER123W 1575 nt1.02□□□□□ -2.25
SUB1P54000 YMR001C-AYMR001C-A 231 nt1.02□□□□□ -2.25
SUB1P54000 IES4YOR189W 351 nt1.01□□□□□ -2.25
SUB1P54000 BFR2YDR299W 1605 nt1□□□□□ -2.25
SUB1P54000 YOR121CYOR121C 306 nt0.98□□□□□ -2.25
SUB1P54000 RKR1YMR247C 4689 nt0.97□□□□□ -2.25
SUB1P54000 YPL044CYPL044C 549 nt0.96□□□□□ -2.26
SUB1P54000 GEA2YEL022W 4380 nt0.95□□□□□ -2.26
SUB1P54000 LTE1YAL024C 4308 nt0.95□□□□□ -2.26
SUB1P54000 OLI1Q0130 231 nt0.95□□□□□ -2.26
SUB1P54000 SEC1YDR164C 2175 nt0.94□□□□□ -2.26
SUB1P54000 IML1YJR138W 4755 nt0.93□□□□□ -2.26
SUB1P54000 HMRA2YCR096C 360 nt0.93□□□□□ -2.26
SUB1P54000 YER137W-AYER137W-A 306 nt0.93□□□□□ -2.26
SUB1P54000 YHR063W-AYHR063W-A 336 nt0.93□□□□□ -2.26
SUB1P54000 tV(UAC)BtV(UAC)B 74 nt0.93□□□□□ -2.26
SUB1P54000 tV(UAC)DtV(UAC)D 74 nt0.93□□□□□ -2.26
SUB1P54000 LEE1YPL054W 906 nt0.93□□□□□ -2.26
SUB1P54000 CSN9YDR179C 489 nt0.92□□□□□ -2.26
SUB1P54000 YLR222C-AYLR222C-A 231 nt0.92□□□□□ -2.26
SUB1P54000 YLR334CYLR334C 381 nt0.92□□□□□ -2.26
SUB1P54000 YPR159C-AYPR159C-A 102 nt0.92□□□□□ -2.26
SUB1P54000 PAU24YBR301W 363 nt0.92□□□□□ -2.26
SUB1P54000 MCM10YIL150C 1716 nt0.92□□□□□ -2.26
SUB1P54000 OST1YJL002C 1431 nt0.91□□□□□ -2.26
SUB1P54000 ASE1YOR058C 2658 nt0.91□□□□□ -2.26
SUB1P54000 CMC4YMR194C-B 222 nt0.91□□□□□ -2.26
SUB1P54000 YDR344CYDR344C 444 nt0.9□□□□□ -2.27
SUB1P54000 YAL068W-AYAL068W-A 255 nt0.9□□□□□ -2.27
SUB1P54000 PAA1YDR071C 576 nt0.89□□□□□ -2.27
SUB1P54000 CHS6YJL099W 2241 nt0.88□□□□□ -2.27
SUB1P54000 SPO21YOL091W 1830 nt0.87□□□□□ -2.27
SUB1P54000 TTI1YKL033W 3117 nt0.87□□□□□ -2.27
SUB1P54000 YDR169C-AYDR169C-A 150 nt0.87□□□□□ -2.27
SUB1P54000 ECM12YHR021W-A 456 nt0.87□□□□□ -2.27
SUB1P54000 YJL120WYJL120W 324 nt0.87□□□□□ -2.27
SUB1P54000 YLR154W-FYLR154W-F 141 nt0.87□□□□□ -2.27
SUB1P54000 NPR2YEL062W 1848 nt0.85□□□□□ -2.27
SUB1P54000 YMR031W-AYMR031W-A 327 nt0.84□□□□□ -2.27
SUB1P54000 BEM3YPL115C 3387 nt0.83□□□□□ -2.28
SUB1P54000 YAR053WYAR053W 297 nt0.83□□□□□ -2.28
SUB1P54000 RPS25BYLR333C 327 nt0.83□□□□□ -2.28
SUB1P54000 YOR011W-AYOR011W-A 207 nt0.83□□□□□ -2.28
SUB1P54000 RPL26BYGR034W 384 nt0.81□□□□□ -2.28
SUB1P54000 YPL225WYPL225W 441 nt0.81□□□□□ -2.28
SUB1P54000 HAL9YOL089C 3093 nt0.8□□□□□ -2.28
SUB1P54000 YSP1YHR155W 3687 nt0.8□□□□□ -2.28
SUB1P54000 YAR029WYAR029W 225 nt0.8□□□□□ -2.28
SUB1P54000 YMR272W-AYMR272W-A 114 nt0.8□□□□□ -2.28
SUB1P54000 YOR218CYOR218C 420 nt0.8□□□□□ -2.28
SUB1P54000 HTB2YBL002W 396 nt0.79□□□□□ -2.28
SUB1P54000 YNL211CYNL211C 261 nt0.79□□□□□ -2.28
SUB1P54000 YOR293C-AYOR293C-A 150 nt0.79□□□□□ -2.28
SUB1P54000 YAL063C-AYAL063C-A 291 nt0.78□□□□□ -2.28
SUB1P54000 FYV10YIL097W 1551 nt0.78□□□□□ -2.29
SUB1P54000 UBP3YER151C 2739 nt0.78□□□□□ -2.29
SUB1P54000 RPL35AYDL191W 363 nt0.77□□□□□ -2.29
SUB1P54000 NHP2YDL208W 471 nt0.77□□□□□ -2.29
SUB1P54000 YHL046W-AYHL046W-A 327 nt0.77□□□□□ -2.29
SUB1P54000 TAR1YLR154W-C 375 nt0.77□□□□□ -2.29
SUB1P54000 IQG1YPL242C 4488 nt0.77□□□□□ -2.29
SUB1P54000 SEC8YPR055W 3198 nt0.76□□□□□ -2.29
SUB1P54000 YFR012W-AYFR012W-A 87 nt0.75□□□□□ -2.29
SUB1P54000 YHR007C-AYHR007C-A 216 nt0.75□□□□□ -2.29
SUB1P54000 YGR035CYGR035C 351 nt0.74□□□□□ -2.29
SUB1P54000 YPR160W-AYPR160W-A 81 nt0.74□□□□□ -2.29
SUB1P54000 YML002WYML002W 2214 nt0.74□□□□□ -2.29
SUB1P54000 VAR1Q0140 1197 nt0.73□□□□□ -2.29
SUB1P54000 YMR321CYMR321C 318 nt0.73□□□□□ -2.29
SUB1P54000 BIL1YOR304C-A 231 nt0.73□□□□□ -2.29
SUB1P54000 tW(UCA)QtW(UCA)Q 74 nt0.72□□□□□ -2.29
Retrieved 100 of 7,029 protein–RNA pairs in 11.4 ms