Protein–RNA interactions for Protein: P53621

COPA, Coatomer subunit alpha, humanhuman

Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPAP53621 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC20.66■□□□□ 0.9
COPAP53621 OR2A1-AS1-207ENST00000486094 819 ntBASIC20.66■□□□□ 0.9
COPAP53621 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
COPAP53621 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC20.66■□□□□ 0.9
COPAP53621 REXO2-208ENST00000539754 791 ntTSL 2 BASIC20.66■□□□□ 0.9
COPAP53621 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC20.66■□□□□ 0.9
COPAP53621 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
COPAP53621 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
COPAP53621 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
COPAP53621 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
COPAP53621 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC20.66■□□□□ 0.9
COPAP53621 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
COPAP53621 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
COPAP53621 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
COPAP53621 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
COPAP53621 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC20.65■□□□□ 0.9
COPAP53621 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
COPAP53621 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC20.65■□□□□ 0.9
COPAP53621 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC20.65■□□□□ 0.9
COPAP53621 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
COPAP53621 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
COPAP53621 PEX7-202ENST00000367756 680 ntTSL 3 BASIC20.65■□□□□ 0.9
COPAP53621 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
COPAP53621 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC20.65■□□□□ 0.9
COPAP53621 C2orf69P4-201ENST00000565394 541 ntBASIC20.65■□□□□ 0.9
COPAP53621 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC20.65■□□□□ 0.9
COPAP53621 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
COPAP53621 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC20.65■□□□□ 0.9
COPAP53621 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
COPAP53621 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC20.65■□□□□ 0.9
COPAP53621 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
COPAP53621 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
COPAP53621 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
COPAP53621 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
COPAP53621 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC20.64■□□□□ 0.89
COPAP53621 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
COPAP53621 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
COPAP53621 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
COPAP53621 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC20.64■□□□□ 0.89
COPAP53621 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC20.64■□□□□ 0.89
COPAP53621 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
COPAP53621 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
COPAP53621 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
COPAP53621 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC20.64■□□□□ 0.89
COPAP53621 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
COPAP53621 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
COPAP53621 AC233263.1-201ENST00000578059 224 ntBASIC20.64■□□□□ 0.89
COPAP53621 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
COPAP53621 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
COPAP53621 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC20.64■□□□□ 0.89
COPAP53621 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC20.64■□□□□ 0.89
COPAP53621 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC20.64■□□□□ 0.89
COPAP53621 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
COPAP53621 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
COPAP53621 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
COPAP53621 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
COPAP53621 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
COPAP53621 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
COPAP53621 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
COPAP53621 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC20.63■□□□□ 0.89
COPAP53621 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC20.63■□□□□ 0.89
COPAP53621 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
COPAP53621 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
COPAP53621 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
COPAP53621 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
COPAP53621 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC20.63■□□□□ 0.89
COPAP53621 KRT17P3-201ENST00000420566 1262 ntBASIC20.63■□□□□ 0.89
COPAP53621 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
COPAP53621 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC20.63■□□□□ 0.89
COPAP53621 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC20.63■□□□□ 0.89
COPAP53621 RHOD-202ENST00000532559 538 ntTSL 3 BASIC20.63■□□□□ 0.89
COPAP53621 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC20.63■□□□□ 0.89
COPAP53621 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC20.63■□□□□ 0.89
COPAP53621 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC20.63■□□□□ 0.89
COPAP53621 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC20.63■□□□□ 0.89
COPAP53621 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC20.63■□□□□ 0.89
COPAP53621 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
COPAP53621 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
COPAP53621 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
COPAP53621 PALM-207ENST00000590161 2137 ntTSL 4 BASIC20.63■□□□□ 0.89
COPAP53621 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC20.63■□□□□ 0.89
COPAP53621 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
COPAP53621 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC20.62■□□□□ 0.89
COPAP53621 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
COPAP53621 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
COPAP53621 DYM-203ENST00000442713 2147 ntTSL 2 BASIC20.62■□□□□ 0.89
COPAP53621 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
COPAP53621 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
COPAP53621 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
COPAP53621 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC20.62■□□□□ 0.89
COPAP53621 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC20.62■□□□□ 0.89
COPAP53621 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
COPAP53621 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC20.62■□□□□ 0.89
COPAP53621 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC20.62■□□□□ 0.89
COPAP53621 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC20.62■□□□□ 0.89
COPAP53621 KLF2-202ENST00000592003 564 ntTSL 3 BASIC20.62■□□□□ 0.89
COPAP53621 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
COPAP53621 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
COPAP53621 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
COPAP53621 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 48.6 ms