Protein–RNA interactions for Protein: P51800

CLCNKA, Chloride channel protein ClC-Ka, humanhuman

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKAP51800 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CLCNKAP51800 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC19.7■□□□□ 0.74
CLCNKAP51800 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CLCNKAP51800 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CLCNKAP51800 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CLCNKAP51800 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC19.69■□□□□ 0.74
CLCNKAP51800 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC19.69■□□□□ 0.74
CLCNKAP51800 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC19.69■□□□□ 0.74
CLCNKAP51800 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
CLCNKAP51800 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
CLCNKAP51800 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CLCNKAP51800 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CLCNKAP51800 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC19.69■□□□□ 0.74
CLCNKAP51800 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CLCNKAP51800 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC19.69■□□□□ 0.74
CLCNKAP51800 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC19.69■□□□□ 0.74
CLCNKAP51800 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CLCNKAP51800 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC19.69■□□□□ 0.74
CLCNKAP51800 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CLCNKAP51800 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
CLCNKAP51800 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CLCNKAP51800 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
CLCNKAP51800 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
CLCNKAP51800 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
CLCNKAP51800 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CLCNKAP51800 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CLCNKAP51800 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
CLCNKAP51800 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CLCNKAP51800 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC19.68■□□□□ 0.74
CLCNKAP51800 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
CLCNKAP51800 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC19.68■□□□□ 0.74
CLCNKAP51800 PTBP1P-201ENST00000554374 1601 ntBASIC19.68■□□□□ 0.74
CLCNKAP51800 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CLCNKAP51800 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
CLCNKAP51800 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC19.68■□□□□ 0.74
CLCNKAP51800 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC19.67■□□□□ 0.74
CLCNKAP51800 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC19.67■□□□□ 0.74
CLCNKAP51800 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
CLCNKAP51800 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC19.67■□□□□ 0.74
CLCNKAP51800 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CLCNKAP51800 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CLCNKAP51800 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
CLCNKAP51800 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CLCNKAP51800 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC19.67■□□□□ 0.74
CLCNKAP51800 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CLCNKAP51800 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CLCNKAP51800 AC006557.6-201ENST00000623071 864 ntBASIC19.67■□□□□ 0.74
CLCNKAP51800 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CLCNKAP51800 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC19.67■□□□□ 0.74
CLCNKAP51800 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CLCNKAP51800 DPP3P2-201ENST00000416030 1696 ntBASIC19.67■□□□□ 0.74
CLCNKAP51800 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CLCNKAP51800 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC19.67■□□□□ 0.74
CLCNKAP51800 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CLCNKAP51800 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CLCNKAP51800 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
CLCNKAP51800 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
CLCNKAP51800 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CLCNKAP51800 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CLCNKAP51800 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CLCNKAP51800 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC19.66■□□□□ 0.74
CLCNKAP51800 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC19.66■□□□□ 0.74
CLCNKAP51800 GCSHP5-201ENST00000443090 522 ntBASIC19.66■□□□□ 0.74
CLCNKAP51800 AC098590.1-201ENST00000468126 897 ntBASIC19.66■□□□□ 0.74
CLCNKAP51800 HES2-206ENST00000489730 730 ntTSL 2 BASIC19.66■□□□□ 0.74
CLCNKAP51800 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC19.66■□□□□ 0.74
CLCNKAP51800 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC19.66■□□□□ 0.74
CLCNKAP51800 RN7SL471P-201ENST00000580476 299 ntBASIC19.66■□□□□ 0.74
CLCNKAP51800 AC069544.1-201ENST00000609399 999 ntBASIC19.66■□□□□ 0.74
CLCNKAP51800 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC19.66■□□□□ 0.74
CLCNKAP51800 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CLCNKAP51800 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CLCNKAP51800 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CLCNKAP51800 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CLCNKAP51800 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC19.66■□□□□ 0.74
CLCNKAP51800 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CLCNKAP51800 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CLCNKAP51800 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC19.65■□□□□ 0.74
CLCNKAP51800 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
CLCNKAP51800 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CLCNKAP51800 H19-201ENST00000411754 1788 ntTSL 5 BASIC19.65■□□□□ 0.74
CLCNKAP51800 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC19.65■□□□□ 0.74
CLCNKAP51800 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC19.65■□□□□ 0.74
CLCNKAP51800 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC19.65■□□□□ 0.74
CLCNKAP51800 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CLCNKAP51800 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
CLCNKAP51800 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC19.65■□□□□ 0.74
CLCNKAP51800 MAX-217ENST00000557277 728 ntTSL 3 BASIC19.65■□□□□ 0.74
CLCNKAP51800 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CLCNKAP51800 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CLCNKAP51800 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
CLCNKAP51800 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
CLCNKAP51800 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
CLCNKAP51800 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CLCNKAP51800 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC19.65■□□□□ 0.74
CLCNKAP51800 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC19.64■□□□□ 0.74
CLCNKAP51800 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.74
CLCNKAP51800 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC19.64■□□□□ 0.74
CLCNKAP51800 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.74
CLCNKAP51800 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC19.64■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 14.9 ms