Protein–RNA interactions for Protein: P48729

CSNK1A1, Casein kinase I isoform alpha, humanhuman

Predictions only

Length 337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1P48729 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC17.86■□□□□ 0.45
CSNK1A1P48729 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
CSNK1A1P48729 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC17.86■□□□□ 0.45
CSNK1A1P48729 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC17.86■□□□□ 0.45
CSNK1A1P48729 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
CSNK1A1P48729 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CSNK1A1P48729 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
CSNK1A1P48729 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CSNK1A1P48729 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CSNK1A1P48729 SERPINH1P1-201ENST00000419794 1249 ntBASIC17.86■□□□□ 0.45
CSNK1A1P48729 NCF1B-203ENST00000435988 1254 ntBASIC17.86■□□□□ 0.45
CSNK1A1P48729 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC17.86■□□□□ 0.45
CSNK1A1P48729 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC17.86■□□□□ 0.45
CSNK1A1P48729 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC17.86■□□□□ 0.45
CSNK1A1P48729 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
CSNK1A1P48729 BRWD1-AS2-201ENST00000603064 1028 ntBASIC17.86■□□□□ 0.45
CSNK1A1P48729 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CSNK1A1P48729 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
CSNK1A1P48729 MARS-234ENST00000630571 216 ntTSL 5 BASIC17.86■□□□□ 0.45
CSNK1A1P48729 MARS-235ENST00000630803 183 ntTSL 3 BASIC17.86■□□□□ 0.45
CSNK1A1P48729 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CSNK1A1P48729 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CSNK1A1P48729 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC17.86■□□□□ 0.45
CSNK1A1P48729 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
CSNK1A1P48729 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
CSNK1A1P48729 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
CSNK1A1P48729 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC17.86■□□□□ 0.45
CSNK1A1P48729 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CSNK1A1P48729 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CSNK1A1P48729 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CSNK1A1P48729 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
CSNK1A1P48729 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC17.86■□□□□ 0.45
CSNK1A1P48729 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CSNK1A1P48729 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC17.86■□□□□ 0.45
CSNK1A1P48729 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CSNK1A1P48729 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
CSNK1A1P48729 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
CSNK1A1P48729 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
CSNK1A1P48729 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CSNK1A1P48729 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CSNK1A1P48729 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CSNK1A1P48729 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC17.85■□□□□ 0.45
CSNK1A1P48729 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC17.85■□□□□ 0.45
CSNK1A1P48729 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
CSNK1A1P48729 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CSNK1A1P48729 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC17.85■□□□□ 0.45
CSNK1A1P48729 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CSNK1A1P48729 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CSNK1A1P48729 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CSNK1A1P48729 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC17.85■□□□□ 0.45
CSNK1A1P48729 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CSNK1A1P48729 AC090192.1-201ENST00000517740 490 ntBASIC17.85■□□□□ 0.45
CSNK1A1P48729 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
CSNK1A1P48729 NXN-202ENST00000537628 1340 ntTSL 3 BASIC17.85■□□□□ 0.45
CSNK1A1P48729 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC17.85■□□□□ 0.45
CSNK1A1P48729 C2orf69P4-201ENST00000565394 541 ntBASIC17.85■□□□□ 0.45
CSNK1A1P48729 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC17.85■□□□□ 0.45
CSNK1A1P48729 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
CSNK1A1P48729 GXYLT1P5-201ENST00000614548 1189 ntBASIC17.85■□□□□ 0.45
CSNK1A1P48729 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CSNK1A1P48729 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CSNK1A1P48729 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CSNK1A1P48729 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC17.84■□□□□ 0.45
CSNK1A1P48729 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC17.84■□□□□ 0.45
CSNK1A1P48729 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
CSNK1A1P48729 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
CSNK1A1P48729 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CSNK1A1P48729 MIPEPP3-201ENST00000412105 444 ntBASIC17.84■□□□□ 0.45
CSNK1A1P48729 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC17.84■□□□□ 0.45
CSNK1A1P48729 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC17.84■□□□□ 0.45
CSNK1A1P48729 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
CSNK1A1P48729 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
CSNK1A1P48729 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC17.84■□□□□ 0.45
CSNK1A1P48729 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CSNK1A1P48729 H19-201ENST00000411754 1788 ntTSL 5 BASIC17.84■□□□□ 0.45
CSNK1A1P48729 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC17.83■□□□□ 0.45
CSNK1A1P48729 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
CSNK1A1P48729 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC17.83■□□□□ 0.45
CSNK1A1P48729 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
CSNK1A1P48729 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC17.83■□□□□ 0.44
CSNK1A1P48729 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
CSNK1A1P48729 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC17.83■□□□□ 0.44
CSNK1A1P48729 TSPY6P-201ENST00000448518 926 ntBASIC17.83■□□□□ 0.44
CSNK1A1P48729 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC17.83■□□□□ 0.44
CSNK1A1P48729 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
CSNK1A1P48729 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC17.83■□□□□ 0.44
CSNK1A1P48729 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC17.83■□□□□ 0.44
CSNK1A1P48729 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
CSNK1A1P48729 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
CSNK1A1P48729 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CSNK1A1P48729 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CSNK1A1P48729 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
CSNK1A1P48729 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC17.83■□□□□ 0.44
CSNK1A1P48729 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC17.82■□□□□ 0.44
CSNK1A1P48729 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
CSNK1A1P48729 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC17.82■□□□□ 0.44
CSNK1A1P48729 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC17.82■□□□□ 0.44
CSNK1A1P48729 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CSNK1A1P48729 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CSNK1A1P48729 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 13 ms