Protein–RNA interactions for Protein: P48431

SOX2, Transcription factor SOX-2, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2P48431 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
SOX2P48431 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC17.63■□□□□ 0.41
SOX2P48431 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC17.63■□□□□ 0.41
SOX2P48431 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC17.63■□□□□ 0.41
SOX2P48431 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
SOX2P48431 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
SOX2P48431 AC018445.3-201ENST00000624177 1945 ntBASIC17.63■□□□□ 0.41
SOX2P48431 AC098818.2-201ENST00000564925 2320 ntBASIC17.63■□□□□ 0.41
SOX2P48431 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
SOX2P48431 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
SOX2P48431 SUDS3P1-201ENST00000505831 966 ntBASIC17.63■□□□□ 0.41
SOX2P48431 STOX2-205ENST00000513034 807 ntTSL 3 BASIC17.63■□□□□ 0.41
SOX2P48431 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC17.63■□□□□ 0.41
SOX2P48431 DUX4L2-201ENST00000561772 1275 ntBASIC17.63■□□□□ 0.41
SOX2P48431 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
SOX2P48431 AC104187.1-201ENST00000607510 612 ntBASIC17.63■□□□□ 0.41
SOX2P48431 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC17.63■□□□□ 0.41
SOX2P48431 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC17.63■□□□□ 0.41
SOX2P48431 DUX4L6-201ENST00000626483 1275 ntBASIC17.63■□□□□ 0.41
SOX2P48431 DUX4L1-201ENST00000627662 1275 ntBASIC17.63■□□□□ 0.41
SOX2P48431 DUX4L8-201ENST00000629013 1275 ntBASIC17.63■□□□□ 0.41
SOX2P48431 DUX4L3-201ENST00000630187 1275 ntBASIC17.63■□□□□ 0.41
SOX2P48431 DUX4L7-201ENST00000630678 1275 ntBASIC17.63■□□□□ 0.41
SOX2P48431 DUX4L5-201ENST00000630834 1275 ntBASIC17.63■□□□□ 0.41
SOX2P48431 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SOX2P48431 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC17.63■□□□□ 0.41
SOX2P48431 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
SOX2P48431 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SOX2P48431 HCG11-201ENST00000411553 5696 ntBASIC17.63■□□□□ 0.41
SOX2P48431 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
SOX2P48431 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC17.63■□□□□ 0.41
SOX2P48431 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC17.63■□□□□ 0.41
SOX2P48431 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC17.63■□□□□ 0.41
SOX2P48431 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC17.63■□□□□ 0.41
SOX2P48431 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
SOX2P48431 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SOX2P48431 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SOX2P48431 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC17.62■□□□□ 0.41
SOX2P48431 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC17.62■□□□□ 0.41
SOX2P48431 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SOX2P48431 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC17.62■□□□□ 0.41
SOX2P48431 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
SOX2P48431 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SOX2P48431 H19-201ENST00000411754 1788 ntTSL 5 BASIC17.62■□□□□ 0.41
SOX2P48431 IRS3P-201ENST00000223076 1006 ntBASIC17.62■□□□□ 0.41
SOX2P48431 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC17.62■□□□□ 0.41
SOX2P48431 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
SOX2P48431 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC17.62■□□□□ 0.41
SOX2P48431 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
SOX2P48431 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
SOX2P48431 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SOX2P48431 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC17.62■□□□□ 0.41
SOX2P48431 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC17.62■□□□□ 0.41
SOX2P48431 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SOX2P48431 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SOX2P48431 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SOX2P48431 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC17.61■□□□□ 0.41
SOX2P48431 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC17.61■□□□□ 0.41
SOX2P48431 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC17.61■□□□□ 0.41
SOX2P48431 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SOX2P48431 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC17.61■□□□□ 0.41
SOX2P48431 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SOX2P48431 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
SOX2P48431 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC17.61■□□□□ 0.41
SOX2P48431 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SOX2P48431 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SOX2P48431 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC17.61■□□□□ 0.41
SOX2P48431 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
SOX2P48431 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SOX2P48431 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SOX2P48431 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SOX2P48431 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC17.61■□□□□ 0.41
SOX2P48431 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC17.61■□□□□ 0.41
SOX2P48431 AP001160.3-201ENST00000601484 763 ntBASIC17.61■□□□□ 0.41
SOX2P48431 KRT8P36-201ENST00000489121 1440 ntBASIC17.61■□□□□ 0.41
SOX2P48431 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC17.61■□□□□ 0.41
SOX2P48431 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
SOX2P48431 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
SOX2P48431 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC17.61■□□□□ 0.41
SOX2P48431 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
SOX2P48431 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
SOX2P48431 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC17.6■□□□□ 0.41
SOX2P48431 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC17.6■□□□□ 0.41
SOX2P48431 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
SOX2P48431 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC17.6■□□□□ 0.41
SOX2P48431 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
SOX2P48431 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC17.6■□□□□ 0.41
SOX2P48431 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
SOX2P48431 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SOX2P48431 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
SOX2P48431 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC17.6■□□□□ 0.41
SOX2P48431 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SOX2P48431 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
SOX2P48431 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SOX2P48431 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
SOX2P48431 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC17.6■□□□□ 0.41
SOX2P48431 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
SOX2P48431 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
SOX2P48431 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
SOX2P48431 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms