Protein–RNA interactions for Protein: P42338

PIK3CB, Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit beta isoform, humanhuman

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PIK3CBP42338 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC19.28■□□□□ 0.68
PIK3CBP42338 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
PIK3CBP42338 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC19.27■□□□□ 0.68
PIK3CBP42338 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PIK3CBP42338 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC19.27■□□□□ 0.68
PIK3CBP42338 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC19.27■□□□□ 0.68
PIK3CBP42338 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC19.27■□□□□ 0.68
PIK3CBP42338 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PIK3CBP42338 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PIK3CBP42338 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.68
PIK3CBP42338 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
PIK3CBP42338 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PIK3CBP42338 PTBP1P-201ENST00000554374 1601 ntBASIC19.27■□□□□ 0.68
PIK3CBP42338 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC19.27■□□□□ 0.68
PIK3CBP42338 HES2-205ENST00000487437 968 ntTSL 3 BASIC19.27■□□□□ 0.68
PIK3CBP42338 OAS3-207ENST00000551007 998 ntTSL 2 BASIC19.27■□□□□ 0.68
PIK3CBP42338 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC19.27■□□□□ 0.68
PIK3CBP42338 BRWD1-AS2-201ENST00000603064 1028 ntBASIC19.27■□□□□ 0.68
PIK3CBP42338 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
PIK3CBP42338 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
PIK3CBP42338 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC19.27■□□□□ 0.67
PIK3CBP42338 KRT17P1-201ENST00000399211 1546 ntBASIC19.26■□□□□ 0.67
PIK3CBP42338 MKRN4P-201ENST00000444706 1521 ntBASIC19.26■□□□□ 0.67
PIK3CBP42338 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
PIK3CBP42338 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PIK3CBP42338 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC19.26■□□□□ 0.67
PIK3CBP42338 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC19.26■□□□□ 0.67
PIK3CBP42338 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PIK3CBP42338 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PIK3CBP42338 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC19.26■□□□□ 0.67
PIK3CBP42338 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PIK3CBP42338 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC19.26■□□□□ 0.67
PIK3CBP42338 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
PIK3CBP42338 NXN-202ENST00000537628 1340 ntTSL 3 BASIC19.25■□□□□ 0.67
PIK3CBP42338 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PIK3CBP42338 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
PIK3CBP42338 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC19.25■□□□□ 0.67
PIK3CBP42338 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PIK3CBP42338 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC19.25■□□□□ 0.67
PIK3CBP42338 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
PIK3CBP42338 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
PIK3CBP42338 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
PIK3CBP42338 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
PIK3CBP42338 BX119927.1-201ENST00000636596 1552 ntBASIC19.25■□□□□ 0.67
PIK3CBP42338 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PIK3CBP42338 LSM12P1-201ENST00000411836 588 ntBASIC19.25■□□□□ 0.67
PIK3CBP42338 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC19.25■□□□□ 0.67
PIK3CBP42338 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC19.25■□□□□ 0.67
PIK3CBP42338 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC19.25■□□□□ 0.67
PIK3CBP42338 C2orf69P4-201ENST00000565394 541 ntBASIC19.25■□□□□ 0.67
PIK3CBP42338 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC19.25■□□□□ 0.67
PIK3CBP42338 MARS-234ENST00000630571 216 ntTSL 5 BASIC19.25■□□□□ 0.67
PIK3CBP42338 MARS-235ENST00000630803 183 ntTSL 3 BASIC19.25■□□□□ 0.67
PIK3CBP42338 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PIK3CBP42338 TCF3P1-201ENST00000423021 1937 ntBASIC19.25■□□□□ 0.67
PIK3CBP42338 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC19.25■□□□□ 0.67
PIK3CBP42338 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PIK3CBP42338 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
PIK3CBP42338 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
PIK3CBP42338 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
PIK3CBP42338 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PIK3CBP42338 CD37-204ENST00000535669 1674 ntTSL 2 BASIC19.24■□□□□ 0.67
PIK3CBP42338 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC19.24■□□□□ 0.67
PIK3CBP42338 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PIK3CBP42338 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
PIK3CBP42338 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PIK3CBP42338 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PIK3CBP42338 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PIK3CBP42338 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC19.24■□□□□ 0.67
PIK3CBP42338 METTL15-202ENST00000403099 795 ntTSL 5 BASIC19.24■□□□□ 0.67
PIK3CBP42338 AC006970.2-201ENST00000450065 779 ntBASIC19.24■□□□□ 0.67
PIK3CBP42338 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC19.24■□□□□ 0.67
PIK3CBP42338 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC19.24■□□□□ 0.67
PIK3CBP42338 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC19.24■□□□□ 0.67
PIK3CBP42338 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC19.24■□□□□ 0.67
PIK3CBP42338 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
PIK3CBP42338 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
PIK3CBP42338 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PIK3CBP42338 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
PIK3CBP42338 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
PIK3CBP42338 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
PIK3CBP42338 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
PIK3CBP42338 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
PIK3CBP42338 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC19.23■□□□□ 0.67
PIK3CBP42338 AL391422.3-201ENST00000603791 2761 ntBASIC19.23■□□□□ 0.67
PIK3CBP42338 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC19.23■□□□□ 0.67
PIK3CBP42338 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PIK3CBP42338 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
PIK3CBP42338 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
PIK3CBP42338 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PIK3CBP42338 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC19.23■□□□□ 0.67
PIK3CBP42338 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC19.23■□□□□ 0.67
PIK3CBP42338 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PIK3CBP42338 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC19.23■□□□□ 0.67
PIK3CBP42338 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC19.23■□□□□ 0.67
PIK3CBP42338 AL121832.2-201ENST00000610979 668 ntBASIC19.23■□□□□ 0.67
PIK3CBP42338 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC19.23■□□□□ 0.67
PIK3CBP42338 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
PIK3CBP42338 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC19.23■□□□□ 0.67
PIK3CBP42338 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms