Protein–RNA interactions for Protein: P40937

RFC5, Replication factor C subunit 5, humanhuman

Predictions only

Length 340 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC5P40937 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
RFC5P40937 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
RFC5P40937 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC22.19■■□□□ 1.14
RFC5P40937 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC22.19■■□□□ 1.14
RFC5P40937 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC22.19■■□□□ 1.14
RFC5P40937 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
RFC5P40937 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC22.19■■□□□ 1.14
RFC5P40937 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
RFC5P40937 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC22.19■■□□□ 1.14
RFC5P40937 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC22.19■■□□□ 1.14
RFC5P40937 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC22.19■■□□□ 1.14
RFC5P40937 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
RFC5P40937 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
RFC5P40937 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC22.18■■□□□ 1.14
RFC5P40937 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC22.18■■□□□ 1.14
RFC5P40937 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
RFC5P40937 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC22.18■■□□□ 1.14
RFC5P40937 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC22.18■■□□□ 1.14
RFC5P40937 C1QBPP2-201ENST00000528754 825 ntBASIC22.18■■□□□ 1.14
RFC5P40937 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC22.18■■□□□ 1.14
RFC5P40937 AL359736.2-201ENST00000621992 437 ntBASIC22.18■■□□□ 1.14
RFC5P40937 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
RFC5P40937 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC22.18■■□□□ 1.14
RFC5P40937 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC22.18■■□□□ 1.14
RFC5P40937 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
RFC5P40937 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC22.17■■□□□ 1.14
RFC5P40937 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC22.17■■□□□ 1.14
RFC5P40937 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
RFC5P40937 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
RFC5P40937 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
RFC5P40937 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC22.17■■□□□ 1.14
RFC5P40937 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
RFC5P40937 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
RFC5P40937 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
RFC5P40937 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC22.17■■□□□ 1.14
RFC5P40937 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC22.17■■□□□ 1.14
RFC5P40937 RPPH1-201ENST00000516869 333 ntBASIC22.17■■□□□ 1.14
RFC5P40937 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC22.17■■□□□ 1.14
RFC5P40937 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
RFC5P40937 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC22.17■■□□□ 1.14
RFC5P40937 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC22.17■■□□□ 1.14
RFC5P40937 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC22.17■■□□□ 1.14
RFC5P40937 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC22.16■■□□□ 1.14
RFC5P40937 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
RFC5P40937 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
RFC5P40937 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC22.16■■□□□ 1.14
RFC5P40937 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
RFC5P40937 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC22.16■■□□□ 1.14
RFC5P40937 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC22.16■■□□□ 1.14
RFC5P40937 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
RFC5P40937 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
RFC5P40937 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
RFC5P40937 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC22.16■■□□□ 1.14
RFC5P40937 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC22.16■■□□□ 1.14
RFC5P40937 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC22.16■■□□□ 1.14
RFC5P40937 AL121829.2-201ENST00000620908 328 ntBASIC22.16■■□□□ 1.14
RFC5P40937 AC066615.1-201ENST00000640911 628 ntBASIC22.16■■□□□ 1.14
RFC5P40937 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC22.16■■□□□ 1.14
RFC5P40937 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
RFC5P40937 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC22.16■■□□□ 1.14
RFC5P40937 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
RFC5P40937 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
RFC5P40937 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC22.16■■□□□ 1.14
RFC5P40937 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
RFC5P40937 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
RFC5P40937 PKD1P6-201ENST00000343738 4769 ntBASIC22.15■■□□□ 1.14
RFC5P40937 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC22.15■■□□□ 1.14
RFC5P40937 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
RFC5P40937 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC22.15■■□□□ 1.14
RFC5P40937 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
RFC5P40937 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC22.15■■□□□ 1.14
RFC5P40937 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC22.15■■□□□ 1.14
RFC5P40937 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC22.15■■□□□ 1.14
RFC5P40937 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC22.15■■□□□ 1.14
RFC5P40937 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
RFC5P40937 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
RFC5P40937 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC22.14■■□□□ 1.14
RFC5P40937 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC22.14■■□□□ 1.14
RFC5P40937 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
RFC5P40937 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
RFC5P40937 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC22.14■■□□□ 1.13
RFC5P40937 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC22.14■■□□□ 1.13
RFC5P40937 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
RFC5P40937 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC22.14■■□□□ 1.13
RFC5P40937 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC22.14■■□□□ 1.13
RFC5P40937 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC22.14■■□□□ 1.13
RFC5P40937 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC22.14■■□□□ 1.13
RFC5P40937 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC22.14■■□□□ 1.13
RFC5P40937 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
RFC5P40937 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC22.14■■□□□ 1.13
RFC5P40937 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC22.14■■□□□ 1.13
RFC5P40937 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC22.14■■□□□ 1.13
RFC5P40937 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
RFC5P40937 ISG20-202ENST00000379224 540 ntTSL 3 BASIC22.13■■□□□ 1.13
RFC5P40937 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC22.13■■□□□ 1.13
RFC5P40937 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC22.13■■□□□ 1.13
RFC5P40937 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC22.13■■□□□ 1.13
RFC5P40937 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC22.13■■□□□ 1.13
RFC5P40937 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC22.13■■□□□ 1.13
RFC5P40937 AL121906.2-201ENST00000621597 723 ntBASIC22.13■■□□□ 1.13
Retrieved 100 of 98,524 protein–RNA pairs in 15.7 ms