Protein–RNA interactions for Protein: P38759

VPS29, Vacuolar protein sorting-associated protein 29, yeastyeast

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VPS29P38759 YAL042C-AYAL042C-A 378 nt3.38□□□□□ -1.87
VPS29P38759 YJR039WYJR039W 3366 nt3.38□□□□□ -1.87
VPS29P38759 RRP5YMR229C 5190 nt3.38□□□□□ -1.87
VPS29P38759 MDM1YML104C 3384 nt3.37□□□□□ -1.87
VPS29P38759 JSN1YJR091C 3276 nt3.37□□□□□ -1.87
VPS29P38759 RSM22YKL155C 1887 nt3.37□□□□□ -1.87
VPS29P38759 SAP185YJL098W 3177 nt3.37□□□□□ -1.87
VPS29P38759 ADR1YDR216W 3972 nt3.35□□□□□ -1.87
VPS29P38759 YLR232WYLR232W 348 nt3.35□□□□□ -1.87
VPS29P38759 YOR161W-AYOR161W-A 81 nt3.35□□□□□ -1.87
VPS29P38759 SEC26YDR238C 2922 nt3.34□□□□□ -1.87
VPS29P38759 TAO3YIL129C 7131 nt3.34□□□□□ -1.88
VPS29P38759 YML002WYML002W 2214 nt3.34□□□□□ -1.88
VPS29P38759 RGC1YPR115W 3252 nt3.33□□□□□ -1.88
VPS29P38759 ASE1YOR058C 2658 nt3.33□□□□□ -1.88
VPS29P38759 INP51YIL002C 2841 nt3.33□□□□□ -1.88
VPS29P38759 YLR278CYLR278C 4026 nt3.33□□□□□ -1.88
VPS29P38759 MRD1YPR112C 2664 nt3.33□□□□□ -1.88
VPS29P38759 AUS1YOR011W 4185 nt3.33□□□□□ -1.88
VPS29P38759 CIN8YEL061C 3003 nt3.33□□□□□ -1.88
VPS29P38759 RAD26YJR035W 3258 nt3.32□□□□□ -1.88
VPS29P38759 RSE1YML049C 4086 nt3.32□□□□□ -1.88
VPS29P38759 MSH5YDL154W 2706 nt3.32□□□□□ -1.88
VPS29P38759 CBF2YGR140W 2871 nt3.32□□□□□ -1.88
VPS29P38759 RTP1YMR185W 2946 nt3.32□□□□□ -1.88
VPS29P38759 LCL1YPL056C 306 nt3.31□□□□□ -1.88
VPS29P38759 SVL3YPL032C 2478 nt3.31□□□□□ -1.88
VPS29P38759 NAB6YML117W 3405 nt3.31□□□□□ -1.88
VPS29P38759 CDC60YPL160W 3273 nt3.31□□□□□ -1.88
VPS29P38759 SSN2YDR443C 4263 nt3.3□□□□□ -1.88
VPS29P38759 ORC3YLL004W 1851 nt3.3□□□□□ -1.88
VPS29P38759 SPA2YLL021W 4401 nt3.3□□□□□ -1.88
VPS29P38759 MSB2YGR014W 3921 nt3.29□□□□□ -1.88
VPS29P38759 VPS8YAL002W 3825 nt3.29□□□□□ -1.88
VPS29P38759 SPO71YDR104C 3738 nt3.29□□□□□ -1.88
VPS29P38759 PNC1YGL037C 651 nt3.28□□□□□ -1.88
VPS29P38759 AGC1YPR021C 2709 nt3.27□□□□□ -1.89
VPS29P38759 YLR286W-AYLR286W-A 135 nt3.27□□□□□ -1.89
VPS29P38759 YPL216WYPL216W 3309 nt3.26□□□□□ -1.89
VPS29P38759 REV3YPL167C 4515 nt3.26□□□□□ -1.89
VPS29P38759 NMD2YHR077C 3270 nt3.24□□□□□ -1.89
VPS29P38759 RPS21AYKR057W 264 nt3.24□□□□□ -1.89
VPS29P38759 NUP159YIL115C 4383 nt3.24□□□□□ -1.89
VPS29P38759 GCN2YDR283C 4980 nt3.24□□□□□ -1.89
VPS29P38759 NUP100YKL068W 2880 nt3.23□□□□□ -1.89
VPS29P38759 SEC21YNL287W 2808 nt3.23□□□□□ -1.89
VPS29P38759 CAF120YNL278W 3183 nt3.23□□□□□ -1.89
VPS29P38759 POL5YEL055C 3069 nt3.22□□□□□ -1.89
VPS29P38759 DNA2YHR164C 4569 nt3.22□□□□□ -1.89
VPS29P38759 MDS3YGL197W 4464 nt3.21□□□□□ -1.9
VPS29P38759 DRS2YAL026C 4068 nt3.21□□□□□ -1.9
VPS29P38759 CTR9YOL145C 3234 nt3.2□□□□□ -1.9
VPS29P38759 YIL169CYIL169C 2988 nt3.2□□□□□ -1.9
VPS29P38759 TUS1YLR425W 3924 nt3.2□□□□□ -1.9
VPS29P38759 FLO1YAR050W 4614 nt3.19□□□□□ -1.9
VPS29P38759 YER172C-AYER172C-A 381 nt3.19□□□□□ -1.9
VPS29P38759 MMS4YBR098W 2076 nt3.18□□□□□ -1.9
VPS29P38759 AMS1YGL156W 3252 nt3.18□□□□□ -1.9
VPS29P38759 YLR149C-AYLR149C-A 87 nt3.18□□□□□ -1.9
VPS29P38759 NOP9YJL010C 2001 nt3.18□□□□□ -1.9
VPS29P38759 RIF1YBR275C 5751 nt3.18□□□□□ -1.9
VPS29P38759 TRM3YDL112W 4311 nt3.18□□□□□ -1.9
VPS29P38759 YEL025CYEL025C 3567 nt3.17□□□□□ -1.9
VPS29P38759 ILS1YBL076C 3219 nt3.17□□□□□ -1.9
VPS29P38759 TCB2YNL087W 3537 nt3.16□□□□□ -1.9
VPS29P38759 RAX2YLR084C 3663 nt3.16□□□□□ -1.9
VPS29P38759 RPM2YML091C 3609 nt3.16□□□□□ -1.9
VPS29P38759 RPN1YHR027C 2982 nt3.15□□□□□ -1.9
VPS29P38759 CSR2YPR030W 3366 nt3.14□□□□□ -1.91
VPS29P38759 SEY1YOR165W 2331 nt3.14□□□□□ -1.91
VPS29P38759 TIM9YEL020W-A 264 nt3.14□□□□□ -1.91
VPS29P38759 MET18YIL128W 3099 nt3.14□□□□□ -1.91
VPS29P38759 IRE1YHR079C 3348 nt3.13□□□□□ -1.91
VPS29P38759 snR70snR70 164 nt3.13□□□□□ -1.91
VPS29P38759 YKL225WYKL225W 348 nt3.13□□□□□ -1.91
VPS29P38759 BMS1YPL217C 3552 nt3.13□□□□□ -1.91
VPS29P38759 SLN1YIL147C 3663 nt3.13□□□□□ -1.91
VPS29P38759 GCN1YGL195W 8019 nt3.12□□□□□ -1.91
VPS29P38759 SEC10YLR166C 2616 nt3.12□□□□□ -1.91
VPS29P38759 MYO2YOR326W 4725 nt3.12□□□□□ -1.91
VPS29P38759 STT4YLR305C 5703 nt3.12□□□□□ -1.91
VPS29P38759 COA6YMR244C-A 315 nt3.12□□□□□ -1.91
VPS29P38759 SGS1YMR190C 4344 nt3.12□□□□□ -1.91
VPS29P38759 STU1YBL034C 4542 nt3.11□□□□□ -1.91
VPS29P38759 SMC1YFL008W 3678 nt3.11□□□□□ -1.91
VPS29P38759 RAD9YDR217C 3930 nt3.11□□□□□ -1.91
VPS29P38759 UFD4YKL010C 4452 nt3.1□□□□□ -1.91
VPS29P38759 YLR041WYLR041W 321 nt3.1□□□□□ -1.91
VPS29P38759 YPR097WYPR097W 3222 nt3.1□□□□□ -1.91
VPS29P38759 YEF3YLR249W 3135 nt3.1□□□□□ -1.91
VPS29P38759 POL2YNL262W 6669 nt3.09□□□□□ -1.91
VPS29P38759 RPS29AYLR388W 171 nt3.09□□□□□ -1.91
VPS29P38759 ALY2YJL084C 3141 nt3.08□□□□□ -1.92
VPS29P38759 tW(CCA)G1tW(CCA)G1 72 nt3.07□□□□□ -1.92
VPS29P38759 tW(CCA)G2tW(CCA)G2 72 nt3.07□□□□□ -1.92
VPS29P38759 tW(CCA)JtW(CCA)J 72 nt3.07□□□□□ -1.92
VPS29P38759 tW(CCA)KtW(CCA)K 72 nt3.07□□□□□ -1.92
VPS29P38759 tW(CCA)MtW(CCA)M 72 nt3.07□□□□□ -1.92
VPS29P38759 tW(CCA)PtW(CCA)P 72 nt3.07□□□□□ -1.92
VPS29P38759 YBR200W-AYBR200W-A 165 nt3.07□□□□□ -1.92
Retrieved 100 of 7,029 protein–RNA pairs in 95.7 ms