Protein–RNA interactions for Protein: P35716

SOX11, Transcription factor SOX-11, humanhuman

Predictions only

Length 441 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX11P35716 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC19.55■□□□□ 0.72
SOX11P35716 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SOX11P35716 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SOX11P35716 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
SOX11P35716 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SOX11P35716 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC19.54■□□□□ 0.72
SOX11P35716 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
SOX11P35716 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC19.54■□□□□ 0.72
SOX11P35716 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
SOX11P35716 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SOX11P35716 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
SOX11P35716 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC19.54■□□□□ 0.72
SOX11P35716 TERF1P5-201ENST00000477545 1207 ntBASIC19.54■□□□□ 0.72
SOX11P35716 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC19.54■□□□□ 0.72
SOX11P35716 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC19.54■□□□□ 0.72
SOX11P35716 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SOX11P35716 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC19.54■□□□□ 0.72
SOX11P35716 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SOX11P35716 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
SOX11P35716 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
SOX11P35716 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
SOX11P35716 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SOX11P35716 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC19.53■□□□□ 0.72
SOX11P35716 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC19.53■□□□□ 0.72
SOX11P35716 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
SOX11P35716 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
SOX11P35716 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC19.53■□□□□ 0.72
SOX11P35716 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC19.53■□□□□ 0.72
SOX11P35716 AC133552.2-202ENST00000575694 574 ntBASIC19.53■□□□□ 0.72
SOX11P35716 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SOX11P35716 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
SOX11P35716 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
SOX11P35716 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SOX11P35716 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SOX11P35716 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
SOX11P35716 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC19.53■□□□□ 0.72
SOX11P35716 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
SOX11P35716 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
SOX11P35716 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC19.52■□□□□ 0.72
SOX11P35716 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
SOX11P35716 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
SOX11P35716 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
SOX11P35716 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
SOX11P35716 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC19.52■□□□□ 0.72
SOX11P35716 AC007322.4-201ENST00000509611 723 ntBASIC19.52■□□□□ 0.72
SOX11P35716 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC19.52■□□□□ 0.72
SOX11P35716 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC19.52■□□□□ 0.72
SOX11P35716 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC19.52■□□□□ 0.72
SOX11P35716 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
SOX11P35716 AC099778.1-201ENST00000568593 1911 ntBASIC19.52■□□□□ 0.72
SOX11P35716 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
SOX11P35716 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
SOX11P35716 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
SOX11P35716 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
SOX11P35716 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.71
SOX11P35716 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC19.52■□□□□ 0.71
SOX11P35716 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SOX11P35716 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC19.51■□□□□ 0.71
SOX11P35716 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
SOX11P35716 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC19.51■□□□□ 0.71
SOX11P35716 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SOX11P35716 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC19.51■□□□□ 0.71
SOX11P35716 AF201337.1-201ENST00000520239 748 ntBASIC19.51■□□□□ 0.71
SOX11P35716 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
SOX11P35716 AC008175.2-201ENST00000612840 297 ntBASIC19.51■□□□□ 0.71
SOX11P35716 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SOX11P35716 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
SOX11P35716 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
SOX11P35716 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
SOX11P35716 MCC-208ENST00000514701 2855 ntTSL 2 BASIC19.51■□□□□ 0.71
SOX11P35716 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SOX11P35716 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC19.51■□□□□ 0.71
SOX11P35716 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC19.51■□□□□ 0.71
SOX11P35716 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SOX11P35716 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC19.5■□□□□ 0.71
SOX11P35716 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC19.5■□□□□ 0.71
SOX11P35716 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
SOX11P35716 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC19.5■□□□□ 0.71
SOX11P35716 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
SOX11P35716 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC19.5■□□□□ 0.71
SOX11P35716 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SOX11P35716 POU5F1P4-201ENST00000413175 1085 ntBASIC19.5■□□□□ 0.71
SOX11P35716 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC19.5■□□□□ 0.71
SOX11P35716 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
SOX11P35716 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC19.5■□□□□ 0.71
SOX11P35716 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC19.5■□□□□ 0.71
SOX11P35716 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
SOX11P35716 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
SOX11P35716 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
SOX11P35716 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
SOX11P35716 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC19.5■□□□□ 0.71
SOX11P35716 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
SOX11P35716 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
SOX11P35716 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
SOX11P35716 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
SOX11P35716 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SOX11P35716 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC19.5■□□□□ 0.71
SOX11P35716 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SOX11P35716 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SOX11P35716 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 19 ms