Protein–RNA interactions for Protein: P29350

PTPN6, Tyrosine-protein phosphatase non-receptor type 6, humanhuman

Predictions only

Length 595 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6P29350 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
PTPN6P29350 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC19.05■□□□□ 0.64
PTPN6P29350 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
PTPN6P29350 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC19.05■□□□□ 0.64
PTPN6P29350 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC19.05■□□□□ 0.64
PTPN6P29350 AC007322.1-201ENST00000426983 750 ntBASIC19.05■□□□□ 0.64
PTPN6P29350 CROCCP5-201ENST00000436658 830 ntBASIC19.05■□□□□ 0.64
PTPN6P29350 CNN2P6-201ENST00000439038 900 ntBASIC19.05■□□□□ 0.64
PTPN6P29350 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC19.05■□□□□ 0.64
PTPN6P29350 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC19.05■□□□□ 0.64
PTPN6P29350 MAZ-216ENST00000616501 991 ntTSL 5 BASIC19.05■□□□□ 0.64
PTPN6P29350 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC19.05■□□□□ 0.64
PTPN6P29350 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PTPN6P29350 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PTPN6P29350 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PTPN6P29350 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC19.05■□□□□ 0.64
PTPN6P29350 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
PTPN6P29350 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PTPN6P29350 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PTPN6P29350 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC19.04■□□□□ 0.64
PTPN6P29350 AC116562.4-201ENST00000641316 2276 ntBASIC19.04■□□□□ 0.64
PTPN6P29350 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PTPN6P29350 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PTPN6P29350 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
PTPN6P29350 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
PTPN6P29350 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC19.04■□□□□ 0.64
PTPN6P29350 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC19.04■□□□□ 0.64
PTPN6P29350 FAM21FP-204ENST00000608637 956 ntBASIC19.04■□□□□ 0.64
PTPN6P29350 PARP1-210ENST00000629232 477 ntTSL 5 BASIC19.04■□□□□ 0.64
PTPN6P29350 AC013268.1-206ENST00000638368 961 ntBASIC19.04■□□□□ 0.64
PTPN6P29350 AC112229.1-201ENST00000639295 961 ntBASIC19.04■□□□□ 0.64
PTPN6P29350 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PTPN6P29350 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
PTPN6P29350 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
PTPN6P29350 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC19.03■□□□□ 0.64
PTPN6P29350 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PTPN6P29350 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC19.03■□□□□ 0.64
PTPN6P29350 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC19.03■□□□□ 0.64
PTPN6P29350 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC19.03■□□□□ 0.64
PTPN6P29350 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PTPN6P29350 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC19.03■□□□□ 0.64
PTPN6P29350 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC19.03■□□□□ 0.64
PTPN6P29350 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC19.03■□□□□ 0.64
PTPN6P29350 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC19.03■□□□□ 0.64
PTPN6P29350 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC19.03■□□□□ 0.64
PTPN6P29350 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PTPN6P29350 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
PTPN6P29350 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC19.03■□□□□ 0.64
PTPN6P29350 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC19.03■□□□□ 0.64
PTPN6P29350 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC19.03■□□□□ 0.64
PTPN6P29350 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC19.03■□□□□ 0.64
PTPN6P29350 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PTPN6P29350 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
PTPN6P29350 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC19.03■□□□□ 0.64
PTPN6P29350 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
PTPN6P29350 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC19.03■□□□□ 0.64
PTPN6P29350 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PTPN6P29350 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
PTPN6P29350 TMEM179-206ENST00000616017 1645 ntBASIC19.03■□□□□ 0.64
PTPN6P29350 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
PTPN6P29350 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC19.02■□□□□ 0.64
PTPN6P29350 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC19.02■□□□□ 0.64
PTPN6P29350 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC19.02■□□□□ 0.64
PTPN6P29350 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC19.02■□□□□ 0.64
PTPN6P29350 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
PTPN6P29350 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
PTPN6P29350 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
PTPN6P29350 MIR663A-201ENST00000385250 93 ntBASIC19.02■□□□□ 0.64
PTPN6P29350 BMP1-204ENST00000397814 836 ntTSL 4 BASIC19.02■□□□□ 0.64
PTPN6P29350 VMO1-204ENST00000441199 741 ntTSL 2 BASIC19.02■□□□□ 0.64
PTPN6P29350 TK2-208ENST00000545043 1120 ntTSL 2 BASIC19.02■□□□□ 0.64
PTPN6P29350 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC19.02■□□□□ 0.64
PTPN6P29350 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
PTPN6P29350 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC19.02■□□□□ 0.64
PTPN6P29350 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC19.02■□□□□ 0.64
PTPN6P29350 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC19.02■□□□□ 0.64
PTPN6P29350 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
PTPN6P29350 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
PTPN6P29350 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
PTPN6P29350 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC19.02■□□□□ 0.64
PTPN6P29350 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.63
PTPN6P29350 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.63
PTPN6P29350 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
PTPN6P29350 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
PTPN6P29350 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PTPN6P29350 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PTPN6P29350 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PTPN6P29350 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PTPN6P29350 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
PTPN6P29350 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
PTPN6P29350 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
PTPN6P29350 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
PTPN6P29350 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
PTPN6P29350 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
PTPN6P29350 AC006970.2-201ENST00000450065 779 ntBASIC19.01■□□□□ 0.63
PTPN6P29350 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
PTPN6P29350 PPP1R14BP3-201ENST00000509033 445 ntBASIC19.01■□□□□ 0.63
PTPN6P29350 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
PTPN6P29350 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
PTPN6P29350 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC19.01■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms