Protein–RNA interactions for Protein: P27539

GDF1, Embryonic growth/differentiation factor 1, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDF1P27539 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC18.22■□□□□ 0.51
GDF1P27539 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC18.22■□□□□ 0.51
GDF1P27539 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC18.22■□□□□ 0.51
GDF1P27539 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
GDF1P27539 AC092720.2-201ENST00000602388 1665 ntBASIC18.22■□□□□ 0.51
GDF1P27539 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC18.22■□□□□ 0.51
GDF1P27539 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
GDF1P27539 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC18.21■□□□□ 0.51
GDF1P27539 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
GDF1P27539 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC18.21■□□□□ 0.51
GDF1P27539 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC18.21■□□□□ 0.51
GDF1P27539 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
GDF1P27539 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
GDF1P27539 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
GDF1P27539 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
GDF1P27539 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
GDF1P27539 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC18.21■□□□□ 0.51
GDF1P27539 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
GDF1P27539 THEM4-205ENST00000489410 643 ntTSL 2 BASIC18.21■□□□□ 0.51
GDF1P27539 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
GDF1P27539 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC18.21■□□□□ 0.51
GDF1P27539 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC18.21■□□□□ 0.51
GDF1P27539 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
GDF1P27539 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC18.21■□□□□ 0.51
GDF1P27539 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
GDF1P27539 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC18.21■□□□□ 0.51
GDF1P27539 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
GDF1P27539 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
GDF1P27539 DPP3P2-201ENST00000416030 1696 ntBASIC18.21■□□□□ 0.51
GDF1P27539 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
GDF1P27539 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
GDF1P27539 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
GDF1P27539 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
GDF1P27539 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
GDF1P27539 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC18.2■□□□□ 0.5
GDF1P27539 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
GDF1P27539 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC18.2■□□□□ 0.5
GDF1P27539 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
GDF1P27539 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
GDF1P27539 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
GDF1P27539 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC18.2■□□□□ 0.5
GDF1P27539 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC18.2■□□□□ 0.5
GDF1P27539 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
GDF1P27539 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC18.2■□□□□ 0.5
GDF1P27539 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC18.2■□□□□ 0.5
GDF1P27539 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC18.2■□□□□ 0.5
GDF1P27539 DET1-205ENST00000558413 583 ntTSL 4 BASIC18.2■□□□□ 0.5
GDF1P27539 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC18.2■□□□□ 0.5
GDF1P27539 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
GDF1P27539 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
GDF1P27539 RN7SL471P-201ENST00000580476 299 ntBASIC18.2■□□□□ 0.5
GDF1P27539 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
GDF1P27539 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC18.2■□□□□ 0.5
GDF1P27539 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
GDF1P27539 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
GDF1P27539 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
GDF1P27539 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC18.2■□□□□ 0.5
GDF1P27539 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
GDF1P27539 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
GDF1P27539 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
GDF1P27539 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
GDF1P27539 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
GDF1P27539 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
GDF1P27539 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC18.19■□□□□ 0.5
GDF1P27539 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
GDF1P27539 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
GDF1P27539 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
GDF1P27539 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC18.19■□□□□ 0.5
GDF1P27539 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC18.19■□□□□ 0.5
GDF1P27539 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
GDF1P27539 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
GDF1P27539 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
GDF1P27539 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC18.19■□□□□ 0.5
GDF1P27539 PEX7-202ENST00000367756 680 ntTSL 3 BASIC18.19■□□□□ 0.5
GDF1P27539 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC18.19■□□□□ 0.5
GDF1P27539 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
GDF1P27539 KRT8P20-201ENST00000423953 1409 ntBASIC18.19■□□□□ 0.5
GDF1P27539 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
GDF1P27539 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC18.19■□□□□ 0.5
GDF1P27539 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
GDF1P27539 HES2-206ENST00000489730 730 ntTSL 2 BASIC18.19■□□□□ 0.5
GDF1P27539 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC18.19■□□□□ 0.5
GDF1P27539 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
GDF1P27539 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
GDF1P27539 AL031963.3-201ENST00000606441 850 ntBASIC18.19■□□□□ 0.5
GDF1P27539 AL359736.2-201ENST00000621992 437 ntBASIC18.19■□□□□ 0.5
GDF1P27539 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
GDF1P27539 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
GDF1P27539 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC18.19■□□□□ 0.5
GDF1P27539 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
GDF1P27539 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
GDF1P27539 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC18.19■□□□□ 0.5
GDF1P27539 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC18.18■□□□□ 0.5
GDF1P27539 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
GDF1P27539 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC18.18■□□□□ 0.5
GDF1P27539 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
GDF1P27539 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC18.18■□□□□ 0.5
GDF1P27539 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
GDF1P27539 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
GDF1P27539 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC18.18■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms