Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
VARSP26640 AC073210.2-201ENST00000430369 194 ntBASIC19.68■□□□□ 0.74
VARSP26640 CYP2T1P-201ENST00000432607 1285 ntBASIC19.68■□□□□ 0.74
VARSP26640 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
VARSP26640 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
VARSP26640 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
VARSP26640 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
VARSP26640 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
VARSP26640 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
VARSP26640 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
VARSP26640 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
VARSP26640 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
VARSP26640 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC19.68■□□□□ 0.74
VARSP26640 AC026471.1-201ENST00000564629 3026 ntBASIC19.68■□□□□ 0.74
VARSP26640 AFG3L1P-217ENST00000557444 2447 ntBASIC19.67■□□□□ 0.74
VARSP26640 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
VARSP26640 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC19.67■□□□□ 0.74
VARSP26640 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
VARSP26640 ME2-218ENST00000640965 2476 ntTSL 5 BASIC19.67■□□□□ 0.74
VARSP26640 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
VARSP26640 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
VARSP26640 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
VARSP26640 PCDHAC2-203ENST00000615316 3011 ntBASIC19.67■□□□□ 0.74
VARSP26640 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
VARSP26640 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
VARSP26640 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC19.67■□□□□ 0.74
VARSP26640 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC19.67■□□□□ 0.74
VARSP26640 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
VARSP26640 PBX1-209ENST00000485769 834 ntTSL 2 BASIC19.67■□□□□ 0.74
VARSP26640 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
VARSP26640 AL162412.1-201ENST00000567129 965 ntBASIC19.67■□□□□ 0.74
VARSP26640 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC19.67■□□□□ 0.74
VARSP26640 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
VARSP26640 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
VARSP26640 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
VARSP26640 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC19.67■□□□□ 0.74
VARSP26640 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
VARSP26640 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
VARSP26640 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC19.66■□□□□ 0.74
VARSP26640 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
VARSP26640 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC19.66■□□□□ 0.74
VARSP26640 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
VARSP26640 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
VARSP26640 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC19.66■□□□□ 0.74
VARSP26640 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
VARSP26640 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC19.66■□□□□ 0.74
VARSP26640 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC19.66■□□□□ 0.74
VARSP26640 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
VARSP26640 APTR-203ENST00000430801 583 ntTSL 5 BASIC19.66■□□□□ 0.74
VARSP26640 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
VARSP26640 RARRES2P4-201ENST00000514074 484 ntBASIC19.66■□□□□ 0.74
VARSP26640 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC19.66■□□□□ 0.74
VARSP26640 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
VARSP26640 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC19.66■□□□□ 0.74
VARSP26640 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC19.66■□□□□ 0.74
VARSP26640 GAMT-205ENST00000640762 751 ntTSL 5 BASIC19.66■□□□□ 0.74
VARSP26640 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
VARSP26640 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
VARSP26640 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
VARSP26640 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
VARSP26640 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
VARSP26640 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
VARSP26640 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
VARSP26640 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC19.66■□□□□ 0.74
VARSP26640 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
VARSP26640 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
VARSP26640 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
VARSP26640 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC19.65■□□□□ 0.74
VARSP26640 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
VARSP26640 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC19.65■□□□□ 0.74
VARSP26640 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC19.65■□□□□ 0.74
VARSP26640 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
VARSP26640 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
VARSP26640 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
VARSP26640 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC19.65■□□□□ 0.74
VARSP26640 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
VARSP26640 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC19.65■□□□□ 0.74
VARSP26640 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC19.65■□□□□ 0.74
VARSP26640 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC19.65■□□□□ 0.74
VARSP26640 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC19.65■□□□□ 0.74
VARSP26640 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
VARSP26640 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC19.65■□□□□ 0.74
VARSP26640 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
VARSP26640 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC19.65■□□□□ 0.74
VARSP26640 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
VARSP26640 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
VARSP26640 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC19.65■□□□□ 0.74
VARSP26640 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
VARSP26640 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC19.65■□□□□ 0.74
VARSP26640 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
VARSP26640 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
VARSP26640 USP39-204ENST00000409766 2033 ntTSL 2 BASIC19.64■□□□□ 0.74
VARSP26640 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC19.64■□□□□ 0.74
VARSP26640 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
VARSP26640 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
VARSP26640 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
VARSP26640 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC19.64■□□□□ 0.73
VARSP26640 METTL15-202ENST00000403099 795 ntTSL 5 BASIC19.64■□□□□ 0.73
VARSP26640 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
VARSP26640 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms