Protein–RNA interactions for Protein: P25847

MSH2, DNA mismatch repair protein MSH2, yeastyeast

Predictions only

Length 964 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
MSH2P25847 YBL008W-AYBL008W-A 240 nt1.98□□□□□ -2.09
MSH2P25847 YMR046W-AYMR046W-A 129 nt1.98□□□□□ -2.09
MSH2P25847 PKH2YOL100W 3246 nt1.98□□□□□ -2.09
MSH2P25847 NUT1YGL151W 3399 nt1.97□□□□□ -2.09
MSH2P25847 RAD50YNL250W 3939 nt1.97□□□□□ -2.09
MSH2P25847 tF(GAA)QtF(GAA)Q 75 nt1.97□□□□□ -2.09
MSH2P25847 VPS55YJR044C 423 nt1.97□□□□□ -2.09
MSH2P25847 PKH3YDR466W 2697 nt1.97□□□□□ -2.09
MSH2P25847 MCM10YIL150C 1716 nt1.97□□□□□ -2.09
MSH2P25847 YLR035C-AYLR035C-A 3468 nt1.96□□□□□ -2.1
MSH2P25847 ALK1YGL021W 2283 nt1.95□□□□□ -2.1
MSH2P25847 PBY1YBR094W 2262 nt1.95□□□□□ -2.1
MSH2P25847 PFD1YJL179W 330 nt1.95□□□□□ -2.1
MSH2P25847 NPR2YEL062W 1848 nt1.95□□□□□ -2.1
MSH2P25847 UFD2YDL190C 2886 nt1.95□□□□□ -2.1
MSH2P25847 LRE1YCL051W 1752 nt1.95□□□□□ -2.1
MSH2P25847 YOR093CYOR093C 4947 nt1.94□□□□□ -2.1
MSH2P25847 RRT15YLR162W-A 189 nt1.94□□□□□ -2.1
MSH2P25847 CTF4YPR135W 2784 nt1.94□□□□□ -2.1
MSH2P25847 YDR406W-AYDR406W-A 246 nt1.93□□□□□ -2.1
MSH2P25847 YBR174CYBR174C 315 nt1.93□□□□□ -2.1
MSH2P25847 KCS1YDR017C 3153 nt1.93□□□□□ -2.1
MSH2P25847 IFH1YLR223C 3258 nt1.93□□□□□ -2.1
MSH2P25847 YDR521WYDR521W 336 nt1.92□□□□□ -2.1
MSH2P25847 YGL217CYGL217C 342 nt1.91□□□□□ -2.1
MSH2P25847 COF1YLL050C 432 nt1.91□□□□□ -2.1
MSH2P25847 YOR376WYOR376W 369 nt1.91□□□□□ -2.1
MSH2P25847 MYO2YOR326W 4725 nt1.9□□□□□ -2.11
MSH2P25847 BPH1YCR032W 6504 nt1.9□□□□□ -2.11
MSH2P25847 SMC4YLR086W 4257 nt1.89□□□□□ -2.11
MSH2P25847 TRM3YDL112W 4311 nt1.89□□□□□ -2.11
MSH2P25847 SLX4YLR135W 2247 nt1.89□□□□□ -2.11
MSH2P25847 YJL022WYJL022W 309 nt1.89□□□□□ -2.11
MSH2P25847 SGF11YPL047W 300 nt1.89□□□□□ -2.11
MSH2P25847 YLL054CYLL054C 2532 nt1.89□□□□□ -2.11
MSH2P25847 snR74snR74 88 nt1.88□□□□□ -2.11
MSH2P25847 YHR210CYHR210C 1026 nt1.88□□□□□ -2.11
MSH2P25847 APQ12YIL040W 417 nt1.88□□□□□ -2.11
MSH2P25847 YBR182C-AYBR182C-A 195 nt1.88□□□□□ -2.11
MSH2P25847 AIM44YPL158C 2277 nt1.88□□□□□ -2.11
MSH2P25847 YCS4YLR272C 3531 nt1.87□□□□□ -2.11
MSH2P25847 ALY2YJL084C 3141 nt1.87□□□□□ -2.11
MSH2P25847 MON2YNL297C 4911 nt1.87□□□□□ -2.11
MSH2P25847 YOR072W-BYOR072W-B 162 nt1.87□□□□□ -2.11
MSH2P25847 YOR302WYOR302W 78 nt1.87□□□□□ -2.11
MSH2P25847 NCA2YPR155C 1851 nt1.87□□□□□ -2.11
MSH2P25847 PIP2YOR363C 2991 nt1.86□□□□□ -2.11
MSH2P25847 YMR272W-BYMR272W-B 108 nt1.86□□□□□ -2.11
MSH2P25847 YKU70YMR284W 1809 nt1.86□□□□□ -2.11
MSH2P25847 YOR019WYOR019W 2193 nt1.86□□□□□ -2.11
MSH2P25847 RTP1YMR185W 2946 nt1.85□□□□□ -2.11
MSH2P25847 YIR030W-AYIR030W-A 384 nt1.85□□□□□ -2.11
MSH2P25847 YLR140WYLR140W 327 nt1.85□□□□□ -2.11
MSH2P25847 YMR247W-AYMR247W-A 144 nt1.85□□□□□ -2.11
MSH2P25847 YNL337WYNL337W 255 nt1.85□□□□□ -2.11
MSH2P25847 YBR206WYBR206W 324 nt1.85□□□□□ -2.11
MSH2P25847 MMS4YBR098W 2076 nt1.85□□□□□ -2.11
MSH2P25847 YDL206WYDL206W 2289 nt1.84□□□□□ -2.11
MSH2P25847 IRC20YLR247C 4671 nt1.84□□□□□ -2.11
MSH2P25847 tT(UGU)HtT(UGU)H 72 nt1.84□□□□□ -2.11
MSH2P25847 VPS15YBR097W 4365 nt1.83□□□□□ -2.12
MSH2P25847 KAP122YGL016W 3246 nt1.82□□□□□ -2.12
MSH2P25847 ECM12YHR021W-A 456 nt1.82□□□□□ -2.12
MSH2P25847 BST1YFL025C 3090 nt1.82□□□□□ -2.12
MSH2P25847 SLD3YGL113W 2007 nt1.81□□□□□ -2.12
MSH2P25847 YLR419WYLR419W 4308 nt1.81□□□□□ -2.12
MSH2P25847 AHC1YOR023C 1701 nt1.81□□□□□ -2.12
MSH2P25847 ISD11YER048W-A 285 nt1.81□□□□□ -2.12
MSH2P25847 OLI1Q0130 231 nt1.81□□□□□ -2.12
MSH2P25847 PAN2YGL094C 3348 nt1.81□□□□□ -2.12
MSH2P25847 MEC1YBR136W 7107 nt1.8□□□□□ -2.12
MSH2P25847 CLU1YMR012W 3834 nt1.8□□□□□ -2.12
MSH2P25847 NUP192YJL039C 5052 nt1.8□□□□□ -2.12
MSH2P25847 YGR109W-BYGR109W-B 4644 nt1.79□□□□□ -2.12
MSH2P25847 PAM16YJL104W 450 nt1.79□□□□□ -2.12
MSH2P25847 YOR161W-BYOR161W-B 261 nt1.79□□□□□ -2.12
MSH2P25847 snR14snR14 160 nt1.79□□□□□ -2.12
MSH2P25847 YCR018C-AYCR018C-A 255 nt1.78□□□□□ -2.12
MSH2P25847 HUG1YML058W-A 207 nt1.78□□□□□ -2.12
MSH2P25847 CFT1YDR301W 4074 nt1.78□□□□□ -2.12
MSH2P25847 FIG4YNL325C 2640 nt1.77□□□□□ -2.13
MSH2P25847 SBE22YHR103W 2559 nt1.77□□□□□ -2.13
MSH2P25847 DNF3YMR162C 4971 nt1.77□□□□□ -2.13
MSH2P25847 YLL019W-AYLL019W-A 93 nt1.77□□□□□ -2.13
MSH2P25847 PMD1YER132C 5262 nt1.76□□□□□ -2.13
MSH2P25847 YLR422WYLR422W 5799 nt1.76□□□□□ -2.13
MSH2P25847 YEL014CYEL014C 306 nt1.76□□□□□ -2.13
MSH2P25847 BRR2YER172C 6492 nt1.76□□□□□ -2.13
MSH2P25847 YDL185C-AYDL185C-A 228 nt1.75□□□□□ -2.13
MSH2P25847 ULI1YFR026C 510 nt1.75□□□□□ -2.13
MSH2P25847 YAR009CYAR009C 3591 nt1.74□□□□□ -2.13
MSH2P25847 YDL196WYDL196W 330 nt1.73□□□□□ -2.13
MSH2P25847 STF2YGR008C 255 nt1.73□□□□□ -2.13
MSH2P25847 SWI4YER111C 3282 nt1.72□□□□□ -2.13
MSH2P25847 YDR354C-AYDR354C-A 144 nt1.71□□□□□ -2.14
MSH2P25847 COA6YMR244C-A 315 nt1.71□□□□□ -2.14
MSH2P25847 SET3YKR029C 2256 nt1.71□□□□□ -2.14
MSH2P25847 IRA1YBR140C 9279 nt1.71□□□□□ -2.14
MSH2P25847 AZF1YOR113W 2745 nt1.71□□□□□ -2.14
MSH2P25847 SMC1YFL008W 3678 nt1.71□□□□□ -2.14
Retrieved 100 of 7,029 protein–RNA pairs in 43.7 ms