Protein–RNA interactions for Protein: P11441

UBL4A, Ubiquitin-like protein 4A, humanhuman

Predictions only

Length 157 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBL4AP11441 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
UBL4AP11441 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
UBL4AP11441 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
UBL4AP11441 AL355472.2-201ENST00000422958 438 ntBASIC18.54■□□□□ 0.56
UBL4AP11441 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC18.54■□□□□ 0.56
UBL4AP11441 CROCCP5-201ENST00000436658 830 ntBASIC18.54■□□□□ 0.56
UBL4AP11441 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
UBL4AP11441 AC006970.2-201ENST00000450065 779 ntBASIC18.54■□□□□ 0.56
UBL4AP11441 ISCU-212ENST00000547005 795 ntTSL 3 BASIC18.54■□□□□ 0.56
UBL4AP11441 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC18.54■□□□□ 0.56
UBL4AP11441 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC18.54■□□□□ 0.56
UBL4AP11441 STK25-205ENST00000405883 1904 ntTSL 2 BASIC18.54■□□□□ 0.56
UBL4AP11441 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
UBL4AP11441 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
UBL4AP11441 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
UBL4AP11441 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
UBL4AP11441 DPP3P2-201ENST00000416030 1696 ntBASIC18.54■□□□□ 0.56
UBL4AP11441 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC18.53■□□□□ 0.56
UBL4AP11441 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
UBL4AP11441 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
UBL4AP11441 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
UBL4AP11441 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
UBL4AP11441 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
UBL4AP11441 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
UBL4AP11441 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
UBL4AP11441 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
UBL4AP11441 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC18.53■□□□□ 0.56
UBL4AP11441 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
UBL4AP11441 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
UBL4AP11441 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC18.53■□□□□ 0.56
UBL4AP11441 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC18.53■□□□□ 0.56
UBL4AP11441 AF201337.1-201ENST00000520239 748 ntBASIC18.53■□□□□ 0.56
UBL4AP11441 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC18.53■□□□□ 0.56
UBL4AP11441 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC18.53■□□□□ 0.56
UBL4AP11441 AC105036.2-201ENST00000569468 176 ntBASIC18.53■□□□□ 0.56
UBL4AP11441 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC18.53■□□□□ 0.56
UBL4AP11441 AL589743.5-201ENST00000616611 1050 ntBASIC18.53■□□□□ 0.56
UBL4AP11441 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
UBL4AP11441 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
UBL4AP11441 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
UBL4AP11441 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
UBL4AP11441 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
UBL4AP11441 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC18.53■□□□□ 0.56
UBL4AP11441 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC18.52■□□□□ 0.56
UBL4AP11441 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
UBL4AP11441 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC18.52■□□□□ 0.56
UBL4AP11441 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
UBL4AP11441 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
UBL4AP11441 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
UBL4AP11441 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC18.52■□□□□ 0.56
UBL4AP11441 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
UBL4AP11441 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC18.52■□□□□ 0.56
UBL4AP11441 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
UBL4AP11441 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC18.52■□□□□ 0.56
UBL4AP11441 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC18.52■□□□□ 0.56
UBL4AP11441 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC18.52■□□□□ 0.56
UBL4AP11441 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC18.52■□□□□ 0.56
UBL4AP11441 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
UBL4AP11441 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
UBL4AP11441 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
UBL4AP11441 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
UBL4AP11441 MKRN4P-201ENST00000444706 1521 ntBASIC18.52■□□□□ 0.56
UBL4AP11441 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
UBL4AP11441 AL162377.1-201ENST00000618844 1793 ntBASIC18.52■□□□□ 0.55
UBL4AP11441 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.55
UBL4AP11441 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
UBL4AP11441 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC18.52■□□□□ 0.55
UBL4AP11441 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC18.51■□□□□ 0.55
UBL4AP11441 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
UBL4AP11441 SMG8-203ENST00000578922 2178 ntBASIC18.51■□□□□ 0.55
UBL4AP11441 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC18.51■□□□□ 0.55
UBL4AP11441 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
UBL4AP11441 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
UBL4AP11441 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC18.51■□□□□ 0.55
UBL4AP11441 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
UBL4AP11441 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
UBL4AP11441 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
UBL4AP11441 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
UBL4AP11441 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC18.51■□□□□ 0.55
UBL4AP11441 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
UBL4AP11441 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC18.51■□□□□ 0.55
UBL4AP11441 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC18.51■□□□□ 0.55
UBL4AP11441 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC18.51■□□□□ 0.55
UBL4AP11441 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC18.51■□□□□ 0.55
UBL4AP11441 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC18.51■□□□□ 0.55
UBL4AP11441 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
UBL4AP11441 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
UBL4AP11441 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC18.51■□□□□ 0.55
UBL4AP11441 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
UBL4AP11441 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
UBL4AP11441 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
UBL4AP11441 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
UBL4AP11441 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC18.5■□□□□ 0.55
UBL4AP11441 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
UBL4AP11441 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
UBL4AP11441 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
UBL4AP11441 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
UBL4AP11441 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
UBL4AP11441 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC18.5■□□□□ 0.55
UBL4AP11441 PHB2-213ENST00000546111 858 ntTSL 2 BASIC18.5■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 18 ms