Protein–RNA interactions for Protein: P10827

THRA, Thyroid hormone receptor alpha, humanhuman

Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THRAP10827 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC20.09■□□□□ 0.81
THRAP10827 BID-204ENST00000399767 2129 ntTSL 2 BASIC20.09■□□□□ 0.81
THRAP10827 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC20.09■□□□□ 0.81
THRAP10827 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC20.09■□□□□ 0.81
THRAP10827 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
THRAP10827 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
THRAP10827 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC20.08■□□□□ 0.81
THRAP10827 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC20.08■□□□□ 0.81
THRAP10827 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
THRAP10827 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC20.08■□□□□ 0.81
THRAP10827 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.81
THRAP10827 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC20.08■□□□□ 0.81
THRAP10827 DET1-207ENST00000564406 2315 ntTSL 2 BASIC20.08■□□□□ 0.81
THRAP10827 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
THRAP10827 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
THRAP10827 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.81
THRAP10827 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
THRAP10827 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC20.08■□□□□ 0.81
THRAP10827 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC20.08■□□□□ 0.81
THRAP10827 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC20.08■□□□□ 0.81
THRAP10827 RNA5SP413-201ENST00000516373 109 ntBASIC20.08■□□□□ 0.81
THRAP10827 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
THRAP10827 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
THRAP10827 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
THRAP10827 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
THRAP10827 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
THRAP10827 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
THRAP10827 AL162377.1-201ENST00000618844 1793 ntBASIC20.08■□□□□ 0.8
THRAP10827 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
THRAP10827 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
THRAP10827 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
THRAP10827 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
THRAP10827 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
THRAP10827 USP39-204ENST00000409766 2033 ntTSL 2 BASIC20.07■□□□□ 0.8
THRAP10827 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
THRAP10827 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
THRAP10827 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
THRAP10827 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC20.07■□□□□ 0.8
THRAP10827 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC20.07■□□□□ 0.8
THRAP10827 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC20.07■□□□□ 0.8
THRAP10827 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
THRAP10827 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
THRAP10827 MYC-209ENST00000641252 345 ntBASIC20.07■□□□□ 0.8
THRAP10827 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC20.07■□□□□ 0.8
THRAP10827 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
THRAP10827 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
THRAP10827 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC20.07■□□□□ 0.8
THRAP10827 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
THRAP10827 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
THRAP10827 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
THRAP10827 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC20.06■□□□□ 0.8
THRAP10827 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
THRAP10827 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
THRAP10827 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
THRAP10827 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
THRAP10827 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
THRAP10827 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
THRAP10827 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
THRAP10827 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
THRAP10827 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC20.06■□□□□ 0.8
THRAP10827 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC20.06■□□□□ 0.8
THRAP10827 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
THRAP10827 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC20.06■□□□□ 0.8
THRAP10827 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
THRAP10827 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
THRAP10827 AC083880.1-201ENST00000608266 535 ntBASIC20.06■□□□□ 0.8
THRAP10827 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
THRAP10827 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
THRAP10827 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
THRAP10827 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC20.06■□□□□ 0.8
THRAP10827 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
THRAP10827 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC20.06■□□□□ 0.8
THRAP10827 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
THRAP10827 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
THRAP10827 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
THRAP10827 BID-203ENST00000399765 1879 ntTSL 2 BASIC20.05■□□□□ 0.8
THRAP10827 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
THRAP10827 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
THRAP10827 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
THRAP10827 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC20.05■□□□□ 0.8
THRAP10827 POU5F1P3-201ENST00000428824 1078 ntBASIC20.05■□□□□ 0.8
THRAP10827 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC20.05■□□□□ 0.8
THRAP10827 RHEB-204ENST00000472642 900 ntTSL 3 BASIC20.05■□□□□ 0.8
THRAP10827 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC20.05■□□□□ 0.8
THRAP10827 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC20.05■□□□□ 0.8
THRAP10827 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC20.05■□□□□ 0.8
THRAP10827 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC20.05■□□□□ 0.8
THRAP10827 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
THRAP10827 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
THRAP10827 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
THRAP10827 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
THRAP10827 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC20.05■□□□□ 0.8
THRAP10827 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
THRAP10827 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC20.04■□□□□ 0.8
THRAP10827 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
THRAP10827 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
THRAP10827 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
THRAP10827 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC20.04■□□□□ 0.8
THRAP10827 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC20.04■□□□□ 0.8
THRAP10827 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 42.6 ms