Protein–RNA interactions for Protein: P08100

RHO, Rhodopsin, humanhuman

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHOP08100 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
RHOP08100 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
RHOP08100 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC20.9■□□□□ 0.94
RHOP08100 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
RHOP08100 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
RHOP08100 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC20.9■□□□□ 0.94
RHOP08100 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
RHOP08100 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC20.9■□□□□ 0.94
RHOP08100 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC20.89■□□□□ 0.94
RHOP08100 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC20.89■□□□□ 0.94
RHOP08100 KRT8P20-201ENST00000423953 1409 ntBASIC20.89■□□□□ 0.94
RHOP08100 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
RHOP08100 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC20.89■□□□□ 0.93
RHOP08100 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
RHOP08100 MMP23A-201ENST00000234610 1017 ntBASIC20.89■□□□□ 0.93
RHOP08100 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC20.89■□□□□ 0.93
RHOP08100 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
RHOP08100 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
RHOP08100 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC20.89■□□□□ 0.93
RHOP08100 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
RHOP08100 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
RHOP08100 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC20.89■□□□□ 0.93
RHOP08100 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC20.89■□□□□ 0.93
RHOP08100 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC20.89■□□□□ 0.93
RHOP08100 AL031963.3-201ENST00000606441 850 ntBASIC20.89■□□□□ 0.93
RHOP08100 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC20.89■□□□□ 0.93
RHOP08100 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC20.89■□□□□ 0.93
RHOP08100 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC20.89■□□□□ 0.93
RHOP08100 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC20.89■□□□□ 0.93
RHOP08100 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
RHOP08100 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC20.89■□□□□ 0.93
RHOP08100 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
RHOP08100 AL121603.2-201ENST00000557373 2117 ntBASIC20.89■□□□□ 0.93
RHOP08100 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC20.89■□□□□ 0.93
RHOP08100 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
RHOP08100 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
RHOP08100 AC133561.1-201ENST00000568600 2415 ntBASIC20.88■□□□□ 0.93
RHOP08100 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
RHOP08100 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
RHOP08100 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC20.88■□□□□ 0.93
RHOP08100 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
RHOP08100 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
RHOP08100 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
RHOP08100 RCN1P1-201ENST00000400413 996 ntBASIC20.88■□□□□ 0.93
RHOP08100 AP002982.1-201ENST00000492365 877 ntBASIC20.88■□□□□ 0.93
RHOP08100 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC20.88■□□□□ 0.93
RHOP08100 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC20.88■□□□□ 0.93
RHOP08100 DECR2-212ENST00000627716 352 ntTSL 2 BASIC20.88■□□□□ 0.93
RHOP08100 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
RHOP08100 AC012676.1-201ENST00000574705 1949 ntBASIC20.88■□□□□ 0.93
RHOP08100 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC20.88■□□□□ 0.93
RHOP08100 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC20.88■□□□□ 0.93
RHOP08100 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC20.88■□□□□ 0.93
RHOP08100 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC20.87■□□□□ 0.93
RHOP08100 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RHOP08100 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RHOP08100 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC20.87■□□□□ 0.93
RHOP08100 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC20.87■□□□□ 0.93
RHOP08100 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RHOP08100 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RHOP08100 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC20.87■□□□□ 0.93
RHOP08100 FEM1AP4-201ENST00000443167 1987 ntBASIC20.87■□□□□ 0.93
RHOP08100 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RHOP08100 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC20.87■□□□□ 0.93
RHOP08100 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC20.87■□□□□ 0.93
RHOP08100 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RHOP08100 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RHOP08100 PPOX-219ENST00000544598 813 ntTSL 2 BASIC20.87■□□□□ 0.93
RHOP08100 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC20.87■□□□□ 0.93
RHOP08100 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
RHOP08100 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
RHOP08100 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RHOP08100 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
RHOP08100 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
RHOP08100 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RHOP08100 PLK5-205ENST00000642079 1969 ntBASIC20.86■□□□□ 0.93
RHOP08100 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
RHOP08100 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
RHOP08100 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
RHOP08100 NUDT16P1-203ENST00000513809 620 ntBASIC20.86■□□□□ 0.93
RHOP08100 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC20.86■□□□□ 0.93
RHOP08100 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC20.86■□□□□ 0.93
RHOP08100 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
RHOP08100 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
RHOP08100 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC20.86■□□□□ 0.93
RHOP08100 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
RHOP08100 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
RHOP08100 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
RHOP08100 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
RHOP08100 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC20.85■□□□□ 0.93
RHOP08100 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC20.85■□□□□ 0.93
RHOP08100 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
RHOP08100 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
RHOP08100 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
RHOP08100 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC20.85■□□□□ 0.93
RHOP08100 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
RHOP08100 TK2-213ENST00000563369 882 ntTSL 5 BASIC20.85■□□□□ 0.93
RHOP08100 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC20.85■□□□□ 0.93
RHOP08100 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
RHOP08100 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 67.7 ms