Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PDGFAP04085 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PDGFAP04085 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC18.76■□□□□ 0.59
PDGFAP04085 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
PDGFAP04085 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
PDGFAP04085 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC18.76■□□□□ 0.59
PDGFAP04085 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
PDGFAP04085 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC18.76■□□□□ 0.59
PDGFAP04085 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC18.76■□□□□ 0.59
PDGFAP04085 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC18.76■□□□□ 0.59
PDGFAP04085 AC110285.5-201ENST00000611501 352 ntBASIC18.76■□□□□ 0.59
PDGFAP04085 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC18.76■□□□□ 0.59
PDGFAP04085 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
PDGFAP04085 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC18.76■□□□□ 0.59
PDGFAP04085 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
PDGFAP04085 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
PDGFAP04085 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
PDGFAP04085 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PDGFAP04085 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
PDGFAP04085 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PDGFAP04085 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
PDGFAP04085 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
PDGFAP04085 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PDGFAP04085 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
PDGFAP04085 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
PDGFAP04085 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC18.75■□□□□ 0.59
PDGFAP04085 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC18.75■□□□□ 0.59
PDGFAP04085 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC18.75■□□□□ 0.59
PDGFAP04085 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC18.75■□□□□ 0.59
PDGFAP04085 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
PDGFAP04085 DHDH-203ENST00000522614 776 ntTSL 5 BASIC18.75■□□□□ 0.59
PDGFAP04085 AC005829.2-201ENST00000571422 1056 ntBASIC18.75■□□□□ 0.59
PDGFAP04085 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
PDGFAP04085 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC18.75■□□□□ 0.59
PDGFAP04085 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
PDGFAP04085 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
PDGFAP04085 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PDGFAP04085 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
PDGFAP04085 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PDGFAP04085 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
PDGFAP04085 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PDGFAP04085 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC18.74■□□□□ 0.59
PDGFAP04085 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC18.74■□□□□ 0.59
PDGFAP04085 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
PDGFAP04085 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
PDGFAP04085 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC18.74■□□□□ 0.59
PDGFAP04085 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
PDGFAP04085 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC18.74■□□□□ 0.59
PDGFAP04085 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PDGFAP04085 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
PDGFAP04085 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
PDGFAP04085 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PDGFAP04085 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PDGFAP04085 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PDGFAP04085 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
PDGFAP04085 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC18.74■□□□□ 0.59
PDGFAP04085 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC18.74■□□□□ 0.59
PDGFAP04085 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC18.74■□□□□ 0.59
PDGFAP04085 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC18.74■□□□□ 0.59
PDGFAP04085 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC18.74■□□□□ 0.59
PDGFAP04085 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
PDGFAP04085 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC18.74■□□□□ 0.59
PDGFAP04085 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
PDGFAP04085 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
PDGFAP04085 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
PDGFAP04085 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PDGFAP04085 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
PDGFAP04085 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
PDGFAP04085 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PDGFAP04085 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
PDGFAP04085 BID-212ENST00000614949 1988 ntTSL 5 BASIC18.73■□□□□ 0.59
PDGFAP04085 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PDGFAP04085 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PDGFAP04085 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC18.73■□□□□ 0.59
PDGFAP04085 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PDGFAP04085 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
PDGFAP04085 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PDGFAP04085 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC18.73■□□□□ 0.59
PDGFAP04085 AL355075.4-201ENST00000554988 638 ntBASIC18.73■□□□□ 0.59
PDGFAP04085 MIR4785-201ENST00000585005 73 ntBASIC18.73■□□□□ 0.59
PDGFAP04085 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
PDGFAP04085 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PDGFAP04085 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC18.73■□□□□ 0.59
PDGFAP04085 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
PDGFAP04085 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
PDGFAP04085 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
PDGFAP04085 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PDGFAP04085 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
PDGFAP04085 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
PDGFAP04085 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
PDGFAP04085 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PDGFAP04085 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PDGFAP04085 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
PDGFAP04085 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
PDGFAP04085 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PDGFAP04085 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
PDGFAP04085 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
PDGFAP04085 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
PDGFAP04085 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC18.72■□□□□ 0.59
PDGFAP04085 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC18.72■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms