Protein–RNA interactions for Protein: P01730

CD4, T-cell surface glycoprotein CD4, humanhuman

Predictions only

Length 458 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD4P01730 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC22.27■■□□□ 1.16
CD4P01730 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
CD4P01730 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
CD4P01730 TREX2-204ENST00000370212 861 ntTSL 5 BASIC22.27■■□□□ 1.16
CD4P01730 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC22.27■■□□□ 1.16
CD4P01730 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC22.27■■□□□ 1.16
CD4P01730 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC22.27■■□□□ 1.16
CD4P01730 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC22.27■■□□□ 1.16
CD4P01730 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC22.27■■□□□ 1.16
CD4P01730 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
CD4P01730 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC22.27■■□□□ 1.16
CD4P01730 GLDC-219ENST00000640208 420 ntTSL 2 BASIC22.27■■□□□ 1.16
CD4P01730 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC22.27■■□□□ 1.16
CD4P01730 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC22.27■■□□□ 1.16
CD4P01730 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC22.27■■□□□ 1.15
CD4P01730 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC22.27■■□□□ 1.15
CD4P01730 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC22.26■■□□□ 1.15
CD4P01730 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC22.26■■□□□ 1.15
CD4P01730 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC22.26■■□□□ 1.15
CD4P01730 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
CD4P01730 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
CD4P01730 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC22.26■■□□□ 1.15
CD4P01730 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC22.26■■□□□ 1.15
CD4P01730 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC22.26■■□□□ 1.15
CD4P01730 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC22.26■■□□□ 1.15
CD4P01730 AC005521.1-201ENST00000393351 872 ntBASIC22.26■■□□□ 1.15
CD4P01730 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC22.26■■□□□ 1.15
CD4P01730 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
CD4P01730 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC22.26■■□□□ 1.15
CD4P01730 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC22.26■■□□□ 1.15
CD4P01730 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
CD4P01730 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC22.26■■□□□ 1.15
CD4P01730 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC22.26■■□□□ 1.15
CD4P01730 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
CD4P01730 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
CD4P01730 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
CD4P01730 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC22.26■■□□□ 1.15
CD4P01730 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC22.26■■□□□ 1.15
CD4P01730 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
CD4P01730 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC22.26■■□□□ 1.15
CD4P01730 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC22.26■■□□□ 1.15
CD4P01730 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
CD4P01730 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC22.25■■□□□ 1.15
CD4P01730 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
CD4P01730 UNC93B2-201ENST00000285383 730 ntBASIC22.25■■□□□ 1.15
CD4P01730 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC22.25■■□□□ 1.15
CD4P01730 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC22.25■■□□□ 1.15
CD4P01730 AP000525.1-201ENST00000608286 694 ntBASIC22.25■■□□□ 1.15
CD4P01730 PALM-207ENST00000590161 2137 ntTSL 4 BASIC22.25■■□□□ 1.15
CD4P01730 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC22.25■■□□□ 1.15
CD4P01730 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
CD4P01730 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC22.24■■□□□ 1.15
CD4P01730 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
CD4P01730 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC22.24■■□□□ 1.15
CD4P01730 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC22.24■■□□□ 1.15
CD4P01730 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
CD4P01730 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC22.24■■□□□ 1.15
CD4P01730 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC22.24■■□□□ 1.15
CD4P01730 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC22.24■■□□□ 1.15
CD4P01730 TPM1-226ENST00000560959 925 ntTSL 2 BASIC22.24■■□□□ 1.15
CD4P01730 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC22.24■■□□□ 1.15
CD4P01730 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC22.24■■□□□ 1.15
CD4P01730 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC22.24■■□□□ 1.15
CD4P01730 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC22.24■■□□□ 1.15
CD4P01730 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
CD4P01730 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC22.24■■□□□ 1.15
CD4P01730 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
CD4P01730 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
CD4P01730 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
CD4P01730 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
CD4P01730 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC22.23■■□□□ 1.15
CD4P01730 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC22.23■■□□□ 1.15
CD4P01730 PNN-205ENST00000556530 601 ntTSL 2 BASIC22.23■■□□□ 1.15
CD4P01730 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
CD4P01730 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC22.23■■□□□ 1.15
CD4P01730 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
CD4P01730 AL121906.2-201ENST00000621597 723 ntBASIC22.23■■□□□ 1.15
CD4P01730 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC22.23■■□□□ 1.15
CD4P01730 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC22.23■■□□□ 1.15
CD4P01730 AC011484.1-201ENST00000377652 1995 ntBASIC22.23■■□□□ 1.15
CD4P01730 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC22.23■■□□□ 1.15
CD4P01730 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
CD4P01730 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
CD4P01730 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
CD4P01730 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC22.22■■□□□ 1.15
CD4P01730 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC22.22■■□□□ 1.15
CD4P01730 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
CD4P01730 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC22.22■■□□□ 1.15
CD4P01730 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
CD4P01730 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC22.22■■□□□ 1.15
CD4P01730 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC22.22■■□□□ 1.15
CD4P01730 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC22.22■■□□□ 1.15
CD4P01730 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC22.22■■□□□ 1.15
CD4P01730 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC22.22■■□□□ 1.15
CD4P01730 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC22.22■■□□□ 1.15
CD4P01730 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC22.22■■□□□ 1.15
CD4P01730 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
CD4P01730 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
CD4P01730 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC22.22■■□□□ 1.15
CD4P01730 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms