Protein–RNA interactions for Protein: O95685

PPP1R3D, Protein phosphatase 1 regulatory subunit 3D, humanhuman

Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R3DO95685 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
PPP1R3DO95685 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC18.13■□□□□ 0.49
PPP1R3DO95685 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
PPP1R3DO95685 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
PPP1R3DO95685 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
PPP1R3DO95685 H19-201ENST00000411754 1788 ntTSL 5 BASIC18.12■□□□□ 0.49
PPP1R3DO95685 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC18.12■□□□□ 0.49
PPP1R3DO95685 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
PPP1R3DO95685 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
PPP1R3DO95685 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
PPP1R3DO95685 PGM5P4-201ENST00000421970 445 ntBASIC18.12■□□□□ 0.49
PPP1R3DO95685 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC18.12■□□□□ 0.49
PPP1R3DO95685 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC18.12■□□□□ 0.49
PPP1R3DO95685 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC18.12■□□□□ 0.49
PPP1R3DO95685 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC18.12■□□□□ 0.49
PPP1R3DO95685 NTF6G-201ENST00000591094 616 ntBASIC18.12■□□□□ 0.49
PPP1R3DO95685 AC010536.3-201ENST00000620306 533 ntBASIC18.12■□□□□ 0.49
PPP1R3DO95685 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PPP1R3DO95685 AC087633.2-202ENST00000565166 1439 ntBASIC18.12■□□□□ 0.49
PPP1R3DO95685 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PPP1R3DO95685 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC18.12■□□□□ 0.49
PPP1R3DO95685 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC18.12■□□□□ 0.49
PPP1R3DO95685 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
PPP1R3DO95685 BMP1-204ENST00000397814 836 ntTSL 4 BASIC18.11■□□□□ 0.49
PPP1R3DO95685 TERF1P5-201ENST00000477545 1207 ntBASIC18.11■□□□□ 0.49
PPP1R3DO95685 CASP6-205ENST00000505486 538 ntTSL 4 BASIC18.11■□□□□ 0.49
PPP1R3DO95685 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
PPP1R3DO95685 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC18.11■□□□□ 0.49
PPP1R3DO95685 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
PPP1R3DO95685 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC18.11■□□□□ 0.49
PPP1R3DO95685 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
PPP1R3DO95685 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PPP1R3DO95685 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
PPP1R3DO95685 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PPP1R3DO95685 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PPP1R3DO95685 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
PPP1R3DO95685 STK25-205ENST00000405883 1904 ntTSL 2 BASIC18.11■□□□□ 0.49
PPP1R3DO95685 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PPP1R3DO95685 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PPP1R3DO95685 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PPP1R3DO95685 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PPP1R3DO95685 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PPP1R3DO95685 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
PPP1R3DO95685 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
PPP1R3DO95685 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
PPP1R3DO95685 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC18.1■□□□□ 0.49
PPP1R3DO95685 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PPP1R3DO95685 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
PPP1R3DO95685 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC18.1■□□□□ 0.49
PPP1R3DO95685 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC18.1■□□□□ 0.49
PPP1R3DO95685 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC18.1■□□□□ 0.49
PPP1R3DO95685 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PPP1R3DO95685 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
PPP1R3DO95685 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
PPP1R3DO95685 UQCRFS1P1-201ENST00000435169 820 ntBASIC18.1■□□□□ 0.49
PPP1R3DO95685 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PPP1R3DO95685 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC18.1■□□□□ 0.49
PPP1R3DO95685 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
PPP1R3DO95685 AL591742.1-201ENST00000604433 565 ntBASIC18.1■□□□□ 0.49
PPP1R3DO95685 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
PPP1R3DO95685 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
PPP1R3DO95685 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC18.1■□□□□ 0.49
PPP1R3DO95685 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC18.09■□□□□ 0.49
PPP1R3DO95685 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC18.09■□□□□ 0.49
PPP1R3DO95685 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
PPP1R3DO95685 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
PPP1R3DO95685 CYP21A1P-202ENST00000354927 1481 ntBASIC18.09■□□□□ 0.49
PPP1R3DO95685 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
PPP1R3DO95685 AC116562.4-201ENST00000641316 2276 ntBASIC18.09■□□□□ 0.49
PPP1R3DO95685 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
PPP1R3DO95685 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PPP1R3DO95685 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
PPP1R3DO95685 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PPP1R3DO95685 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC18.09■□□□□ 0.49
PPP1R3DO95685 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
PPP1R3DO95685 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC18.09■□□□□ 0.49
PPP1R3DO95685 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
PPP1R3DO95685 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
PPP1R3DO95685 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PPP1R3DO95685 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PPP1R3DO95685 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
PPP1R3DO95685 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
PPP1R3DO95685 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
PPP1R3DO95685 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC18.08■□□□□ 0.49
PPP1R3DO95685 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.49
PPP1R3DO95685 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC18.08■□□□□ 0.49
PPP1R3DO95685 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.49
PPP1R3DO95685 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
PPP1R3DO95685 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
PPP1R3DO95685 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC18.08■□□□□ 0.49
PPP1R3DO95685 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC18.08■□□□□ 0.49
PPP1R3DO95685 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC18.08■□□□□ 0.48
PPP1R3DO95685 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
PPP1R3DO95685 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
PPP1R3DO95685 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC18.08■□□□□ 0.48
PPP1R3DO95685 DBI-210ENST00000542275 757 ntTSL 5 BASIC18.08■□□□□ 0.48
PPP1R3DO95685 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.48
PPP1R3DO95685 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
PPP1R3DO95685 TMEM179-206ENST00000616017 1645 ntBASIC18.08■□□□□ 0.48
PPP1R3DO95685 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms