Protein–RNA interactions for Protein: O95398

RAPGEF3, Rap guanine nucleotide exchange factor 3, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3O95398 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC30.39■■■□□ 2.46
RAPGEF3O95398 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC30.39■■■□□ 2.46
RAPGEF3O95398 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC30.39■■■□□ 2.45
RAPGEF3O95398 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC30.39■■■□□ 2.45
RAPGEF3O95398 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC30.38■■■□□ 2.45
RAPGEF3O95398 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC30.38■■■□□ 2.45
RAPGEF3O95398 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC30.38■■■□□ 2.45
RAPGEF3O95398 TSPY5P-201ENST00000426936 936 ntBASIC30.38■■■□□ 2.45
RAPGEF3O95398 FDX2-206ENST00000492239 773 ntTSL 2 BASIC30.38■■■□□ 2.45
RAPGEF3O95398 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC30.38■■■□□ 2.45
RAPGEF3O95398 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC30.38■■■□□ 2.45
RAPGEF3O95398 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC30.38■■■□□ 2.45
RAPGEF3O95398 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC30.38■■■□□ 2.45
RAPGEF3O95398 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC30.37■■■□□ 2.45
RAPGEF3O95398 BET1L-202ENST00000332865 533 ntTSL 5 BASIC30.37■■■□□ 2.45
RAPGEF3O95398 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC30.37■■■□□ 2.45
RAPGEF3O95398 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC30.37■■■□□ 2.45
RAPGEF3O95398 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC30.37■■■□□ 2.45
RAPGEF3O95398 AC093458.2-201ENST00000623150 629 ntBASIC30.37■■■□□ 2.45
RAPGEF3O95398 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC30.37■■■□□ 2.45
RAPGEF3O95398 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC30.37■■■□□ 2.45
RAPGEF3O95398 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC30.36■■■□□ 2.45
RAPGEF3O95398 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC30.36■■■□□ 2.45
RAPGEF3O95398 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
RAPGEF3O95398 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
RAPGEF3O95398 CD320-202ENST00000537716 1119 ntTSL 2 BASIC30.36■■■□□ 2.45
RAPGEF3O95398 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC30.36■■■□□ 2.45
RAPGEF3O95398 AL445675.2-201ENST00000620291 557 ntBASIC30.36■■■□□ 2.45
RAPGEF3O95398 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC30.36■■■□□ 2.45
RAPGEF3O95398 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC30.36■■■□□ 2.45
RAPGEF3O95398 ME2-206ENST00000638410 2289 ntTSL 5 BASIC30.35■■■□□ 2.45
RAPGEF3O95398 ME2-210ENST00000639255 2262 ntTSL 5 BASIC30.35■■■□□ 2.45
RAPGEF3O95398 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC30.35■■■□□ 2.45
RAPGEF3O95398 CLEC4GP1-201ENST00000596555 870 ntBASIC30.35■■■□□ 2.45
RAPGEF3O95398 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC30.35■■■□□ 2.45
RAPGEF3O95398 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC30.35■■■□□ 2.45
RAPGEF3O95398 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC30.35■■■□□ 2.45
RAPGEF3O95398 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC30.34■■■□□ 2.45
RAPGEF3O95398 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC30.34■■■□□ 2.45
RAPGEF3O95398 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC30.34■■■□□ 2.45
RAPGEF3O95398 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC30.34■■■□□ 2.45
RAPGEF3O95398 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC30.34■■■□□ 2.45
RAPGEF3O95398 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC30.34■■■□□ 2.45
RAPGEF3O95398 HMGA1P5-201ENST00000412453 271 ntBASIC30.34■■■□□ 2.45
RAPGEF3O95398 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC30.34■■■□□ 2.45
RAPGEF3O95398 PP7080-204ENST00000510714 601 ntTSL 3 BASIC30.34■■■□□ 2.45
RAPGEF3O95398 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC30.34■■■□□ 2.45
RAPGEF3O95398 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC30.34■■■□□ 2.45
RAPGEF3O95398 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC30.34■■■□□ 2.45
RAPGEF3O95398 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC30.34■■■□□ 2.45
RAPGEF3O95398 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC30.34■■■□□ 2.45
RAPGEF3O95398 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC30.34■■■□□ 2.45
RAPGEF3O95398 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC30.34■■■□□ 2.45
RAPGEF3O95398 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC30.33■■■□□ 2.45
RAPGEF3O95398 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC30.33■■■□□ 2.45
RAPGEF3O95398 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC30.33■■■□□ 2.45
RAPGEF3O95398 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC30.33■■■□□ 2.45
RAPGEF3O95398 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC30.33■■■□□ 2.45
RAPGEF3O95398 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC30.33■■■□□ 2.45
RAPGEF3O95398 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC30.33■■■□□ 2.45
RAPGEF3O95398 C1QL1P1-201ENST00000568105 661 ntBASIC30.33■■■□□ 2.45
RAPGEF3O95398 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC30.33■■■□□ 2.45
RAPGEF3O95398 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC30.33■■■□□ 2.45
RAPGEF3O95398 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC30.33■■■□□ 2.45
RAPGEF3O95398 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC30.33■■■□□ 2.45
RAPGEF3O95398 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC30.32■■■□□ 2.44
RAPGEF3O95398 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC30.32■■■□□ 2.44
RAPGEF3O95398 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC30.32■■■□□ 2.44
RAPGEF3O95398 IER3-202ENST00000376377 1350 ntBASIC30.32■■■□□ 2.44
RAPGEF3O95398 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC30.32■■■□□ 2.44
RAPGEF3O95398 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC30.32■■■□□ 2.44
RAPGEF3O95398 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC30.32■■■□□ 2.44
RAPGEF3O95398 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC30.32■■■□□ 2.44
RAPGEF3O95398 CD70-202ENST00000423145 881 ntTSL 2 BASIC30.32■■■□□ 2.44
RAPGEF3O95398 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC30.32■■■□□ 2.44
RAPGEF3O95398 AL121956.5-201ENST00000625261 221 ntBASIC30.32■■■□□ 2.44
RAPGEF3O95398 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC30.32■■■□□ 2.44
RAPGEF3O95398 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC30.32■■■□□ 2.44
RAPGEF3O95398 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC30.31■■■□□ 2.44
RAPGEF3O95398 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC30.31■■■□□ 2.44
RAPGEF3O95398 FAM207BP-201ENST00000447172 505 ntBASIC30.31■■■□□ 2.44
RAPGEF3O95398 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC30.31■■■□□ 2.44
RAPGEF3O95398 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC30.31■■■□□ 2.44
RAPGEF3O95398 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC30.31■■■□□ 2.44
RAPGEF3O95398 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC30.31■■■□□ 2.44
RAPGEF3O95398 KRT8P36-201ENST00000489121 1440 ntBASIC30.3■■■□□ 2.44
RAPGEF3O95398 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC30.3■■■□□ 2.44
RAPGEF3O95398 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC30.3■■■□□ 2.44
RAPGEF3O95398 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC30.3■■■□□ 2.44
RAPGEF3O95398 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
RAPGEF3O95398 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
RAPGEF3O95398 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC30.3■■■□□ 2.44
RAPGEF3O95398 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC30.3■■■□□ 2.44
RAPGEF3O95398 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC30.3■■■□□ 2.44
RAPGEF3O95398 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC30.3■■■□□ 2.44
RAPGEF3O95398 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC30.29■■■□□ 2.44
RAPGEF3O95398 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
RAPGEF3O95398 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC30.29■■■□□ 2.44
RAPGEF3O95398 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
RAPGEF3O95398 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC30.29■■■□□ 2.44
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms