Protein–RNA interactions for Protein: O75489

NDUFS3, NADH dehydrogenase [ubiquinone] iron-sulfur protein 3, mitochondrial, humanhuman

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFS3O75489 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
NDUFS3O75489 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC20.03■□□□□ 0.8
NDUFS3O75489 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
NDUFS3O75489 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
NDUFS3O75489 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC20.03■□□□□ 0.8
NDUFS3O75489 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
NDUFS3O75489 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
NDUFS3O75489 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC20.03■□□□□ 0.8
NDUFS3O75489 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
NDUFS3O75489 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
NDUFS3O75489 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
NDUFS3O75489 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
NDUFS3O75489 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC20.02■□□□□ 0.8
NDUFS3O75489 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
NDUFS3O75489 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
NDUFS3O75489 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC20.02■□□□□ 0.8
NDUFS3O75489 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
NDUFS3O75489 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC20.02■□□□□ 0.8
NDUFS3O75489 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
NDUFS3O75489 AF201337.1-201ENST00000520239 748 ntBASIC20.02■□□□□ 0.8
NDUFS3O75489 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
NDUFS3O75489 ISCU-212ENST00000547005 795 ntTSL 3 BASIC20.02■□□□□ 0.8
NDUFS3O75489 AC105036.2-201ENST00000569468 176 ntBASIC20.02■□□□□ 0.8
NDUFS3O75489 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC20.02■□□□□ 0.8
NDUFS3O75489 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
NDUFS3O75489 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
NDUFS3O75489 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.79
NDUFS3O75489 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.79
NDUFS3O75489 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
NDUFS3O75489 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
NDUFS3O75489 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
NDUFS3O75489 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
NDUFS3O75489 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
NDUFS3O75489 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC20.01■□□□□ 0.79
NDUFS3O75489 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
NDUFS3O75489 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
NDUFS3O75489 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
NDUFS3O75489 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC20.01■□□□□ 0.79
NDUFS3O75489 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
NDUFS3O75489 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
NDUFS3O75489 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
NDUFS3O75489 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
NDUFS3O75489 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
NDUFS3O75489 RAP2CP1-201ENST00000605103 478 ntBASIC20.01■□□□□ 0.79
NDUFS3O75489 AL050303.2-201ENST00000619798 666 ntBASIC20.01■□□□□ 0.79
NDUFS3O75489 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
NDUFS3O75489 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
NDUFS3O75489 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
NDUFS3O75489 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC20.01■□□□□ 0.79
NDUFS3O75489 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
NDUFS3O75489 H19-201ENST00000411754 1788 ntTSL 5 BASIC20■□□□□ 0.79
NDUFS3O75489 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
NDUFS3O75489 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC20■□□□□ 0.79
NDUFS3O75489 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC20■□□□□ 0.79
NDUFS3O75489 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
NDUFS3O75489 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
NDUFS3O75489 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC20■□□□□ 0.79
NDUFS3O75489 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC20■□□□□ 0.79
NDUFS3O75489 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC20■□□□□ 0.79
NDUFS3O75489 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
NDUFS3O75489 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC20■□□□□ 0.79
NDUFS3O75489 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC20■□□□□ 0.79
NDUFS3O75489 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC20■□□□□ 0.79
NDUFS3O75489 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
NDUFS3O75489 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
NDUFS3O75489 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC20■□□□□ 0.79
NDUFS3O75489 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
NDUFS3O75489 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
NDUFS3O75489 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
NDUFS3O75489 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC20■□□□□ 0.79
NDUFS3O75489 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC19.99■□□□□ 0.79
NDUFS3O75489 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
NDUFS3O75489 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC19.99■□□□□ 0.79
NDUFS3O75489 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
NDUFS3O75489 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC19.99■□□□□ 0.79
NDUFS3O75489 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
NDUFS3O75489 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC19.99■□□□□ 0.79
NDUFS3O75489 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
NDUFS3O75489 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
NDUFS3O75489 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
NDUFS3O75489 KRT17P1-201ENST00000399211 1546 ntBASIC19.99■□□□□ 0.79
NDUFS3O75489 MKRN4P-201ENST00000444706 1521 ntBASIC19.99■□□□□ 0.79
NDUFS3O75489 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
NDUFS3O75489 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
NDUFS3O75489 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
NDUFS3O75489 LSM12P1-201ENST00000411836 588 ntBASIC19.99■□□□□ 0.79
NDUFS3O75489 CROCCP5-201ENST00000436658 830 ntBASIC19.99■□□□□ 0.79
NDUFS3O75489 AC006970.2-201ENST00000450065 779 ntBASIC19.99■□□□□ 0.79
NDUFS3O75489 HES2-205ENST00000487437 968 ntTSL 3 BASIC19.99■□□□□ 0.79
NDUFS3O75489 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC19.99■□□□□ 0.79
NDUFS3O75489 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC19.99■□□□□ 0.79
NDUFS3O75489 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC19.99■□□□□ 0.79
NDUFS3O75489 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
NDUFS3O75489 AC092666.2-201ENST00000613287 246 ntBASIC19.99■□□□□ 0.79
NDUFS3O75489 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC19.99■□□□□ 0.79
NDUFS3O75489 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
NDUFS3O75489 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC19.99■□□□□ 0.79
NDUFS3O75489 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC19.99■□□□□ 0.79
NDUFS3O75489 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
NDUFS3O75489 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC19.98■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms