Protein–RNA interactions for Protein: O75487

GPC4, Glypican-4, humanhuman

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC4O75487 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
GPC4O75487 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
GPC4O75487 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
GPC4O75487 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC20.06■□□□□ 0.8
GPC4O75487 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
GPC4O75487 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC20.06■□□□□ 0.8
GPC4O75487 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
GPC4O75487 CYP21A1P-202ENST00000354927 1481 ntBASIC20.06■□□□□ 0.8
GPC4O75487 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
GPC4O75487 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC20.06■□□□□ 0.8
GPC4O75487 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC20.06■□□□□ 0.8
GPC4O75487 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC20.06■□□□□ 0.8
GPC4O75487 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
GPC4O75487 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
GPC4O75487 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC20.06■□□□□ 0.8
GPC4O75487 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
GPC4O75487 BID-203ENST00000399765 1879 ntTSL 2 BASIC20.06■□□□□ 0.8
GPC4O75487 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC20.06■□□□□ 0.8
GPC4O75487 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
GPC4O75487 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
GPC4O75487 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC20.06■□□□□ 0.8
GPC4O75487 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC20.06■□□□□ 0.8
GPC4O75487 ME2-218ENST00000640965 2476 ntTSL 5 BASIC20.06■□□□□ 0.8
GPC4O75487 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
GPC4O75487 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC20.06■□□□□ 0.8
GPC4O75487 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC20.06■□□□□ 0.8
GPC4O75487 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC20.06■□□□□ 0.8
GPC4O75487 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
GPC4O75487 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
GPC4O75487 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
GPC4O75487 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC20.05■□□□□ 0.8
GPC4O75487 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
GPC4O75487 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
GPC4O75487 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC20.05■□□□□ 0.8
GPC4O75487 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
GPC4O75487 MIR663A-201ENST00000385250 93 ntBASIC20.05■□□□□ 0.8
GPC4O75487 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC20.05■□□□□ 0.8
GPC4O75487 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC20.05■□□□□ 0.8
GPC4O75487 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC20.05■□□□□ 0.8
GPC4O75487 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
GPC4O75487 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
GPC4O75487 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
GPC4O75487 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
GPC4O75487 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC20.04■□□□□ 0.8
GPC4O75487 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
GPC4O75487 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
GPC4O75487 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
GPC4O75487 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
GPC4O75487 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC20.04■□□□□ 0.8
GPC4O75487 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
GPC4O75487 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC20.04■□□□□ 0.8
GPC4O75487 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
GPC4O75487 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
GPC4O75487 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC20.04■□□□□ 0.8
GPC4O75487 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC20.04■□□□□ 0.8
GPC4O75487 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
GPC4O75487 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC20.04■□□□□ 0.8
GPC4O75487 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
GPC4O75487 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC20.04■□□□□ 0.8
GPC4O75487 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
GPC4O75487 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC20.04■□□□□ 0.8
GPC4O75487 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
GPC4O75487 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
GPC4O75487 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC20.04■□□□□ 0.8
GPC4O75487 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
GPC4O75487 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
GPC4O75487 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
GPC4O75487 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
GPC4O75487 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC20.03■□□□□ 0.8
GPC4O75487 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC20.03■□□□□ 0.8
GPC4O75487 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
GPC4O75487 AC087633.2-202ENST00000565166 1439 ntBASIC20.03■□□□□ 0.8
GPC4O75487 AC010980.2-201ENST00000587099 1412 ntBASIC20.03■□□□□ 0.8
GPC4O75487 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
GPC4O75487 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
GPC4O75487 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC20.03■□□□□ 0.8
GPC4O75487 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
GPC4O75487 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
GPC4O75487 MCRIP2P1-201ENST00000394346 511 ntBASIC20.03■□□□□ 0.8
GPC4O75487 AC093787.1-201ENST00000450396 207 ntBASIC20.03■□□□□ 0.8
GPC4O75487 PPP1R14BP3-201ENST00000509033 445 ntBASIC20.03■□□□□ 0.8
GPC4O75487 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC20.03■□□□□ 0.8
GPC4O75487 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC20.03■□□□□ 0.8
GPC4O75487 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
GPC4O75487 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
GPC4O75487 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
GPC4O75487 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC20.03■□□□□ 0.8
GPC4O75487 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
GPC4O75487 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC20.03■□□□□ 0.8
GPC4O75487 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC20.03■□□□□ 0.8
GPC4O75487 DET1-207ENST00000564406 2315 ntTSL 2 BASIC20.03■□□□□ 0.8
GPC4O75487 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
GPC4O75487 AFG3L1P-217ENST00000557444 2447 ntBASIC20.03■□□□□ 0.8
GPC4O75487 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC20.03■□□□□ 0.8
GPC4O75487 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC20.03■□□□□ 0.8
GPC4O75487 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
GPC4O75487 RNF165-205ENST00000588679 2904 ntBASIC20.03■□□□□ 0.8
GPC4O75487 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
GPC4O75487 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
GPC4O75487 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms