Protein–RNA interactions for Protein: O75486

SUPT3H, Transcription initiation protein SPT3 homolog, humanhuman

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT3HO75486 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SUPT3HO75486 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
SUPT3HO75486 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SUPT3HO75486 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
SUPT3HO75486 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC19.85■□□□□ 0.77
SUPT3HO75486 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
SUPT3HO75486 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC19.85■□□□□ 0.77
SUPT3HO75486 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SUPT3HO75486 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC19.84■□□□□ 0.77
SUPT3HO75486 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC19.84■□□□□ 0.77
SUPT3HO75486 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC19.84■□□□□ 0.77
SUPT3HO75486 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SUPT3HO75486 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC19.84■□□□□ 0.77
SUPT3HO75486 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
SUPT3HO75486 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC19.84■□□□□ 0.77
SUPT3HO75486 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SUPT3HO75486 AL020996.1-203ENST00000536896 2307 ntBASIC19.84■□□□□ 0.77
SUPT3HO75486 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
SUPT3HO75486 GXYLT1P2-201ENST00000433312 1230 ntBASIC19.84■□□□□ 0.77
SUPT3HO75486 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC19.84■□□□□ 0.77
SUPT3HO75486 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SUPT3HO75486 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
SUPT3HO75486 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC19.84■□□□□ 0.77
SUPT3HO75486 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
SUPT3HO75486 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SUPT3HO75486 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC19.84■□□□□ 0.77
SUPT3HO75486 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SUPT3HO75486 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC19.84■□□□□ 0.77
SUPT3HO75486 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
SUPT3HO75486 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC19.84■□□□□ 0.77
SUPT3HO75486 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
SUPT3HO75486 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC19.83■□□□□ 0.77
SUPT3HO75486 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
SUPT3HO75486 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
SUPT3HO75486 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC19.83■□□□□ 0.77
SUPT3HO75486 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC19.83■□□□□ 0.77
SUPT3HO75486 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC19.83■□□□□ 0.77
SUPT3HO75486 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
SUPT3HO75486 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.77
SUPT3HO75486 PGM5P4-201ENST00000421970 445 ntBASIC19.83■□□□□ 0.77
SUPT3HO75486 KRT18P11-201ENST00000435214 1283 ntBASIC19.83■□□□□ 0.77
SUPT3HO75486 KRT18P5-201ENST00000436075 1291 ntBASIC19.83■□□□□ 0.77
SUPT3HO75486 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
SUPT3HO75486 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
SUPT3HO75486 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
SUPT3HO75486 AC013268.1-206ENST00000638368 961 ntBASIC19.83■□□□□ 0.77
SUPT3HO75486 AC112229.1-201ENST00000639295 961 ntBASIC19.83■□□□□ 0.77
SUPT3HO75486 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC19.83■□□□□ 0.76
SUPT3HO75486 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
SUPT3HO75486 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC19.83■□□□□ 0.76
SUPT3HO75486 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC19.83■□□□□ 0.76
SUPT3HO75486 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.76
SUPT3HO75486 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC19.83■□□□□ 0.76
SUPT3HO75486 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
SUPT3HO75486 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
SUPT3HO75486 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC19.82■□□□□ 0.76
SUPT3HO75486 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SUPT3HO75486 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SUPT3HO75486 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC19.82■□□□□ 0.76
SUPT3HO75486 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
SUPT3HO75486 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SUPT3HO75486 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC19.82■□□□□ 0.76
SUPT3HO75486 AC016769.1-201ENST00000409132 1010 ntBASIC19.82■□□□□ 0.76
SUPT3HO75486 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC19.82■□□□□ 0.76
SUPT3HO75486 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SUPT3HO75486 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC19.82■□□□□ 0.76
SUPT3HO75486 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC19.82■□□□□ 0.76
SUPT3HO75486 AL356652.1-201ENST00000615962 565 ntBASIC19.82■□□□□ 0.76
SUPT3HO75486 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
SUPT3HO75486 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC19.82■□□□□ 0.76
SUPT3HO75486 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
SUPT3HO75486 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC19.82■□□□□ 0.76
SUPT3HO75486 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SUPT3HO75486 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
SUPT3HO75486 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC19.82■□□□□ 0.76
SUPT3HO75486 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SUPT3HO75486 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC19.81■□□□□ 0.76
SUPT3HO75486 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
SUPT3HO75486 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC19.81■□□□□ 0.76
SUPT3HO75486 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC19.81■□□□□ 0.76
SUPT3HO75486 BID-204ENST00000399767 2129 ntTSL 2 BASIC19.81■□□□□ 0.76
SUPT3HO75486 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
SUPT3HO75486 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
SUPT3HO75486 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SUPT3HO75486 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
SUPT3HO75486 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
SUPT3HO75486 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
SUPT3HO75486 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC19.81■□□□□ 0.76
SUPT3HO75486 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC19.81■□□□□ 0.76
SUPT3HO75486 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
SUPT3HO75486 AC087633.2-202ENST00000565166 1439 ntBASIC19.81■□□□□ 0.76
SUPT3HO75486 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SUPT3HO75486 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
SUPT3HO75486 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SUPT3HO75486 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
SUPT3HO75486 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC19.81■□□□□ 0.76
SUPT3HO75486 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
SUPT3HO75486 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC19.81■□□□□ 0.76
SUPT3HO75486 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
SUPT3HO75486 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms