Protein–RNA interactions for Protein: O75346

ZNF253, Zinc finger protein 253, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF253O75346 AC008406.3-201ENST00000620001 1374 ntBASIC15.59■□□□□ 0.09
ZNF253O75346 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
ZNF253O75346 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
ZNF253O75346 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC15.59■□□□□ 0.09
ZNF253O75346 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC15.59■□□□□ 0.09
ZNF253O75346 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC15.59■□□□□ 0.09
ZNF253O75346 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
ZNF253O75346 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
ZNF253O75346 KRT87P-202ENST00000534226 1464 ntBASIC15.59■□□□□ 0.09
ZNF253O75346 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
ZNF253O75346 AC004408.2-201ENST00000623613 2777 ntBASIC15.58■□□□□ 0.09
ZNF253O75346 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
ZNF253O75346 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
ZNF253O75346 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC15.58■□□□□ 0.09
ZNF253O75346 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC15.58■□□□□ 0.09
ZNF253O75346 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC15.58■□□□□ 0.09
ZNF253O75346 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC15.58■□□□□ 0.09
ZNF253O75346 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
ZNF253O75346 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
ZNF253O75346 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
ZNF253O75346 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
ZNF253O75346 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC15.58■□□□□ 0.08
ZNF253O75346 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
ZNF253O75346 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC15.58■□□□□ 0.08
ZNF253O75346 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
ZNF253O75346 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC15.58■□□□□ 0.08
ZNF253O75346 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
ZNF253O75346 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC15.58■□□□□ 0.08
ZNF253O75346 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC15.58■□□□□ 0.08
ZNF253O75346 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
ZNF253O75346 AC131212.1-201ENST00000613771 668 ntBASIC15.58■□□□□ 0.08
ZNF253O75346 AC120498.10-201ENST00000621827 505 ntBASIC15.58■□□□□ 0.08
ZNF253O75346 AL358852.1-201ENST00000623174 1268 ntBASIC15.58■□□□□ 0.08
ZNF253O75346 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
ZNF253O75346 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
ZNF253O75346 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC15.58■□□□□ 0.08
ZNF253O75346 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
ZNF253O75346 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
ZNF253O75346 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
ZNF253O75346 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
ZNF253O75346 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
ZNF253O75346 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
ZNF253O75346 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC15.58■□□□□ 0.08
ZNF253O75346 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
ZNF253O75346 AC116562.4-201ENST00000641316 2276 ntBASIC15.57■□□□□ 0.08
ZNF253O75346 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
ZNF253O75346 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
ZNF253O75346 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC15.57■□□□□ 0.08
ZNF253O75346 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC15.57■□□□□ 0.08
ZNF253O75346 USP39-204ENST00000409766 2033 ntTSL 2 BASIC15.57■□□□□ 0.08
ZNF253O75346 AL512408.1-201ENST00000569378 2000 ntBASIC15.57■□□□□ 0.08
ZNF253O75346 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
ZNF253O75346 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC15.57■□□□□ 0.08
ZNF253O75346 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC15.57■□□□□ 0.08
ZNF253O75346 AF213884.3-201ENST00000563833 479 ntBASIC15.57■□□□□ 0.08
ZNF253O75346 AC138907.5-202ENST00000569484 235 ntBASIC15.57■□□□□ 0.08
ZNF253O75346 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
ZNF253O75346 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
ZNF253O75346 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
ZNF253O75346 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
ZNF253O75346 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
ZNF253O75346 AP000974.1-201ENST00000623909 2387 ntBASIC15.57■□□□□ 0.08
ZNF253O75346 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
ZNF253O75346 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
ZNF253O75346 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC15.57■□□□□ 0.08
ZNF253O75346 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
ZNF253O75346 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
ZNF253O75346 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
ZNF253O75346 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
ZNF253O75346 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
ZNF253O75346 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
ZNF253O75346 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
ZNF253O75346 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
ZNF253O75346 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC15.56■□□□□ 0.08
ZNF253O75346 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC15.56■□□□□ 0.08
ZNF253O75346 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
ZNF253O75346 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
ZNF253O75346 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
ZNF253O75346 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC15.56■□□□□ 0.08
ZNF253O75346 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
ZNF253O75346 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
ZNF253O75346 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
ZNF253O75346 PEMT-206ENST00000435340 960 ntTSL 5 BASIC15.56■□□□□ 0.08
ZNF253O75346 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC15.56■□□□□ 0.08
ZNF253O75346 AC079140.4-201ENST00000507448 529 ntBASIC15.56■□□□□ 0.08
ZNF253O75346 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC15.56■□□□□ 0.08
ZNF253O75346 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC15.56■□□□□ 0.08
ZNF253O75346 RARRES2P11-201ENST00000635158 484 ntBASIC15.56■□□□□ 0.08
ZNF253O75346 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
ZNF253O75346 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
ZNF253O75346 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
ZNF253O75346 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
ZNF253O75346 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC15.56■□□□□ 0.08
ZNF253O75346 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
ZNF253O75346 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC15.56■□□□□ 0.08
ZNF253O75346 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
ZNF253O75346 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
ZNF253O75346 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
ZNF253O75346 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
ZNF253O75346 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms