Protein–RNA interactions for Protein: O60939

SCN2B, Sodium channel subunit beta-2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2BO60939 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC19.03■□□□□ 0.64
SCN2BO60939 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC19.03■□□□□ 0.64
SCN2BO60939 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SCN2BO60939 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SCN2BO60939 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SCN2BO60939 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
SCN2BO60939 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SCN2BO60939 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC19.03■□□□□ 0.64
SCN2BO60939 PLD4-205ENST00000553861 667 ntTSL 2 BASIC19.03■□□□□ 0.64
SCN2BO60939 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC19.03■□□□□ 0.64
SCN2BO60939 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC19.03■□□□□ 0.64
SCN2BO60939 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC19.03■□□□□ 0.64
SCN2BO60939 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
SCN2BO60939 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC19.03■□□□□ 0.64
SCN2BO60939 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SCN2BO60939 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SCN2BO60939 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
SCN2BO60939 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
SCN2BO60939 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
SCN2BO60939 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC19.03■□□□□ 0.64
SCN2BO60939 AL158211.5-201ENST00000623583 2518 ntBASIC19.03■□□□□ 0.64
SCN2BO60939 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
SCN2BO60939 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC19.03■□□□□ 0.64
SCN2BO60939 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
SCN2BO60939 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
SCN2BO60939 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
SCN2BO60939 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
SCN2BO60939 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
SCN2BO60939 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC19.02■□□□□ 0.64
SCN2BO60939 CD37-204ENST00000535669 1674 ntTSL 2 BASIC19.02■□□□□ 0.64
SCN2BO60939 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC19.02■□□□□ 0.64
SCN2BO60939 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC19.02■□□□□ 0.64
SCN2BO60939 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
SCN2BO60939 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
SCN2BO60939 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
SCN2BO60939 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC19.02■□□□□ 0.64
SCN2BO60939 DBI-210ENST00000542275 757 ntTSL 5 BASIC19.02■□□□□ 0.64
SCN2BO60939 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
SCN2BO60939 AC087623.3-201ENST00000607047 1098 ntBASIC19.02■□□□□ 0.64
SCN2BO60939 TMEM179-206ENST00000616017 1645 ntBASIC19.02■□□□□ 0.64
SCN2BO60939 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
SCN2BO60939 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC19.02■□□□□ 0.64
SCN2BO60939 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
SCN2BO60939 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC19.02■□□□□ 0.63
SCN2BO60939 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
SCN2BO60939 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
SCN2BO60939 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.63
SCN2BO60939 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
SCN2BO60939 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
SCN2BO60939 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC19.02■□□□□ 0.63
SCN2BO60939 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.63
SCN2BO60939 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SCN2BO60939 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC19.01■□□□□ 0.63
SCN2BO60939 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
SCN2BO60939 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
SCN2BO60939 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
SCN2BO60939 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
SCN2BO60939 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC19.01■□□□□ 0.63
SCN2BO60939 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
SCN2BO60939 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC19.01■□□□□ 0.63
SCN2BO60939 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
SCN2BO60939 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC19.01■□□□□ 0.63
SCN2BO60939 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
SCN2BO60939 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SCN2BO60939 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC19.01■□□□□ 0.63
SCN2BO60939 PGM5P4-201ENST00000421970 445 ntBASIC19.01■□□□□ 0.63
SCN2BO60939 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SCN2BO60939 STK25-205ENST00000405883 1904 ntTSL 2 BASIC19.01■□□□□ 0.63
SCN2BO60939 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SCN2BO60939 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC19.01■□□□□ 0.63
SCN2BO60939 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
SCN2BO60939 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SCN2BO60939 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SCN2BO60939 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
SCN2BO60939 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC19■□□□□ 0.63
SCN2BO60939 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SCN2BO60939 PTBP1P-201ENST00000554374 1601 ntBASIC19■□□□□ 0.63
SCN2BO60939 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SCN2BO60939 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC19■□□□□ 0.63
SCN2BO60939 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
SCN2BO60939 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC19■□□□□ 0.63
SCN2BO60939 SPI1-203ENST00000533030 661 ntTSL 2 BASIC19■□□□□ 0.63
SCN2BO60939 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC19■□□□□ 0.63
SCN2BO60939 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC19■□□□□ 0.63
SCN2BO60939 AC013268.1-206ENST00000638368 961 ntBASIC19■□□□□ 0.63
SCN2BO60939 AC112229.1-201ENST00000639295 961 ntBASIC19■□□□□ 0.63
SCN2BO60939 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SCN2BO60939 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SCN2BO60939 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SCN2BO60939 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC19■□□□□ 0.63
SCN2BO60939 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SCN2BO60939 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SCN2BO60939 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC18.99■□□□□ 0.63
SCN2BO60939 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SCN2BO60939 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SCN2BO60939 HSCB-202ENST00000398941 955 ntTSL 2 BASIC18.99■□□□□ 0.63
SCN2BO60939 KRT18P11-201ENST00000435214 1283 ntBASIC18.99■□□□□ 0.63
SCN2BO60939 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC18.99■□□□□ 0.63
SCN2BO60939 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC18.99■□□□□ 0.63
SCN2BO60939 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC18.99■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 81.2 ms