Protein–RNA interactions for Protein: O60931

CTNS, Cystinosin, humanhuman

Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNSO60931 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CTNSO60931 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
CTNSO60931 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CTNSO60931 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC18.83■□□□□ 0.6
CTNSO60931 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC18.83■□□□□ 0.6
CTNSO60931 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC18.83■□□□□ 0.6
CTNSO60931 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC18.83■□□□□ 0.6
CTNSO60931 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC18.83■□□□□ 0.6
CTNSO60931 CD99P1-205ENST00000527459 561 ntBASIC18.83■□□□□ 0.6
CTNSO60931 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC18.83■□□□□ 0.6
CTNSO60931 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.6
CTNSO60931 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC18.83■□□□□ 0.6
CTNSO60931 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CTNSO60931 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC18.83■□□□□ 0.6
CTNSO60931 AL162377.1-201ENST00000618844 1793 ntBASIC18.83■□□□□ 0.6
CTNSO60931 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CTNSO60931 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CTNSO60931 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CTNSO60931 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
CTNSO60931 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CTNSO60931 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
CTNSO60931 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CTNSO60931 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
CTNSO60931 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
CTNSO60931 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CTNSO60931 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC18.82■□□□□ 0.6
CTNSO60931 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
CTNSO60931 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC18.82■□□□□ 0.6
CTNSO60931 UNC93B5-201ENST00000530315 699 ntBASIC18.82■□□□□ 0.6
CTNSO60931 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC18.82■□□□□ 0.6
CTNSO60931 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC18.82■□□□□ 0.6
CTNSO60931 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC18.82■□□□□ 0.6
CTNSO60931 TBCB-214ENST00000629269 413 ntTSL 5 BASIC18.82■□□□□ 0.6
CTNSO60931 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CTNSO60931 AL512408.1-201ENST00000569378 2000 ntBASIC18.82■□□□□ 0.6
CTNSO60931 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC18.82■□□□□ 0.6
CTNSO60931 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CTNSO60931 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC18.82■□□□□ 0.6
CTNSO60931 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CTNSO60931 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
CTNSO60931 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CTNSO60931 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CTNSO60931 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CTNSO60931 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC18.81■□□□□ 0.6
CTNSO60931 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CTNSO60931 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC18.81■□□□□ 0.6
CTNSO60931 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CTNSO60931 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC18.81■□□□□ 0.6
CTNSO60931 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CTNSO60931 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC18.81■□□□□ 0.6
CTNSO60931 OR2A1-AS1-207ENST00000486094 819 ntBASIC18.81■□□□□ 0.6
CTNSO60931 SLC29A4P2-201ENST00000504749 1089 ntBASIC18.81■□□□□ 0.6
CTNSO60931 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC18.81■□□□□ 0.6
CTNSO60931 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC18.81■□□□□ 0.6
CTNSO60931 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CTNSO60931 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC18.81■□□□□ 0.6
CTNSO60931 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC18.81■□□□□ 0.6
CTNSO60931 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
CTNSO60931 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC18.81■□□□□ 0.6
CTNSO60931 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CTNSO60931 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC18.81■□□□□ 0.6
CTNSO60931 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CTNSO60931 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
CTNSO60931 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
CTNSO60931 LINC01521-201ENST00000504184 1943 ntBASIC18.8■□□□□ 0.6
CTNSO60931 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CTNSO60931 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC18.8■□□□□ 0.6
CTNSO60931 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CTNSO60931 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CTNSO60931 RER1-204ENST00000378518 522 ntTSL 3 BASIC18.8■□□□□ 0.6
CTNSO60931 GAS7-202ENST00000396115 929 ntTSL 5 BASIC18.8■□□□□ 0.6
CTNSO60931 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC18.8■□□□□ 0.6
CTNSO60931 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC18.8■□□□□ 0.6
CTNSO60931 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC18.8■□□□□ 0.6
CTNSO60931 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC18.8■□□□□ 0.6
CTNSO60931 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC18.8■□□□□ 0.6
CTNSO60931 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CTNSO60931 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC18.8■□□□□ 0.6
CTNSO60931 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CTNSO60931 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
CTNSO60931 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
CTNSO60931 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
CTNSO60931 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CTNSO60931 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC18.79■□□□□ 0.6
CTNSO60931 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CTNSO60931 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CTNSO60931 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC18.79■□□□□ 0.6
CTNSO60931 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC18.79■□□□□ 0.6
CTNSO60931 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CTNSO60931 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CTNSO60931 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
CTNSO60931 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC18.79■□□□□ 0.6
CTNSO60931 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CTNSO60931 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CTNSO60931 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC18.79■□□□□ 0.6
CTNSO60931 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC18.79■□□□□ 0.6
CTNSO60931 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC18.79■□□□□ 0.6
CTNSO60931 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
CTNSO60931 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
CTNSO60931 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC18.79■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 42.9 ms