Protein–RNA interactions for Protein: O60609

GFRA3, GDNF family receptor alpha-3, humanhuman

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA3O60609 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC19.67■□□□□ 0.74
GFRA3O60609 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
GFRA3O60609 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC19.67■□□□□ 0.74
GFRA3O60609 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
GFRA3O60609 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC19.67■□□□□ 0.74
GFRA3O60609 UNC93B7-201ENST00000509439 705 ntBASIC19.67■□□□□ 0.74
GFRA3O60609 AC023632.3-201ENST00000521633 145 ntBASIC19.67■□□□□ 0.74
GFRA3O60609 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC19.67■□□□□ 0.74
GFRA3O60609 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC19.67■□□□□ 0.74
GFRA3O60609 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
GFRA3O60609 AC010653.2-201ENST00000623505 997 ntBASIC19.67■□□□□ 0.74
GFRA3O60609 AC117500.6-201ENST00000624871 588 ntBASIC19.67■□□□□ 0.74
GFRA3O60609 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC19.67■□□□□ 0.74
GFRA3O60609 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
GFRA3O60609 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
GFRA3O60609 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
GFRA3O60609 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
GFRA3O60609 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC19.67■□□□□ 0.74
GFRA3O60609 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC19.67■□□□□ 0.74
GFRA3O60609 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC19.67■□□□□ 0.74
GFRA3O60609 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC19.67■□□□□ 0.74
GFRA3O60609 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
GFRA3O60609 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
GFRA3O60609 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
GFRA3O60609 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
GFRA3O60609 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
GFRA3O60609 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC19.66■□□□□ 0.74
GFRA3O60609 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
GFRA3O60609 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
GFRA3O60609 MED17-227ENST00000640521 2047 ntTSL 5 BASIC19.66■□□□□ 0.74
GFRA3O60609 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
GFRA3O60609 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC19.66■□□□□ 0.74
GFRA3O60609 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
GFRA3O60609 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
GFRA3O60609 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC19.65■□□□□ 0.74
GFRA3O60609 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC19.65■□□□□ 0.74
GFRA3O60609 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC19.65■□□□□ 0.74
GFRA3O60609 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC19.65■□□□□ 0.74
GFRA3O60609 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
GFRA3O60609 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC19.65■□□□□ 0.74
GFRA3O60609 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
GFRA3O60609 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC19.65■□□□□ 0.74
GFRA3O60609 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
GFRA3O60609 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC19.65■□□□□ 0.74
GFRA3O60609 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
GFRA3O60609 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC19.65■□□□□ 0.74
GFRA3O60609 PRSS44-201ENST00000515154 1146 ntBASIC19.65■□□□□ 0.74
GFRA3O60609 AL445675.2-201ENST00000620291 557 ntBASIC19.65■□□□□ 0.74
GFRA3O60609 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
GFRA3O60609 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.74
GFRA3O60609 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
GFRA3O60609 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC19.64■□□□□ 0.73
GFRA3O60609 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC19.64■□□□□ 0.73
GFRA3O60609 RPP21-221ENST00000428040 594 ntTSL 2 BASIC19.64■□□□□ 0.73
GFRA3O60609 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
GFRA3O60609 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
GFRA3O60609 KRT18P38-201ENST00000449496 1282 ntBASIC19.64■□□□□ 0.73
GFRA3O60609 AL441883.1-201ENST00000566170 1045 ntBASIC19.64■□□□□ 0.73
GFRA3O60609 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC19.64■□□□□ 0.73
GFRA3O60609 NPAP1P7-201ENST00000613027 823 ntBASIC19.64■□□□□ 0.73
GFRA3O60609 AL023973.1-201ENST00000624619 620 ntBASIC19.64■□□□□ 0.73
GFRA3O60609 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
GFRA3O60609 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC19.64■□□□□ 0.73
GFRA3O60609 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
GFRA3O60609 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
GFRA3O60609 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
GFRA3O60609 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
GFRA3O60609 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
GFRA3O60609 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
GFRA3O60609 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
GFRA3O60609 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC19.63■□□□□ 0.73
GFRA3O60609 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
GFRA3O60609 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC19.63■□□□□ 0.73
GFRA3O60609 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC19.63■□□□□ 0.73
GFRA3O60609 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC19.63■□□□□ 0.73
GFRA3O60609 AC092183.1-201ENST00000469884 875 ntBASIC19.63■□□□□ 0.73
GFRA3O60609 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC19.63■□□□□ 0.73
GFRA3O60609 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
GFRA3O60609 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
GFRA3O60609 ZNF444P1-201ENST00000559497 298 ntBASIC19.63■□□□□ 0.73
GFRA3O60609 AL512604.3-201ENST00000569583 964 ntBASIC19.63■□□□□ 0.73
GFRA3O60609 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC19.63■□□□□ 0.73
GFRA3O60609 LINC02084-201ENST00000606069 1096 ntBASIC19.63■□□□□ 0.73
GFRA3O60609 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
GFRA3O60609 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
GFRA3O60609 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
GFRA3O60609 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
GFRA3O60609 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
GFRA3O60609 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
GFRA3O60609 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
GFRA3O60609 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
GFRA3O60609 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
GFRA3O60609 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
GFRA3O60609 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
GFRA3O60609 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
GFRA3O60609 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
GFRA3O60609 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC19.62■□□□□ 0.73
GFRA3O60609 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC19.62■□□□□ 0.73
GFRA3O60609 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
GFRA3O60609 SLC25A1P2-201ENST00000430693 912 ntBASIC19.62■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms