Protein–RNA interactions for Protein: O60294

LCMT2, tRNA wybutosine-synthesizing protein 4, humanhuman

Known RBP Predictions only

Length 686 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCMT2O60294 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
LCMT2O60294 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC19.22■□□□□ 0.67
LCMT2O60294 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
LCMT2O60294 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC19.22■□□□□ 0.67
LCMT2O60294 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
LCMT2O60294 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
LCMT2O60294 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC19.21■□□□□ 0.67
LCMT2O60294 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
LCMT2O60294 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
LCMT2O60294 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC19.21■□□□□ 0.67
LCMT2O60294 AC112907.3-201ENST00000577781 2400 ntBASIC19.21■□□□□ 0.67
LCMT2O60294 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
LCMT2O60294 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
LCMT2O60294 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
LCMT2O60294 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
LCMT2O60294 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC19.21■□□□□ 0.67
LCMT2O60294 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
LCMT2O60294 USP39-204ENST00000409766 2033 ntTSL 2 BASIC19.21■□□□□ 0.67
LCMT2O60294 DENND3-207ENST00000518347 850 ntTSL 2 BASIC19.21■□□□□ 0.67
LCMT2O60294 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC19.21■□□□□ 0.67
LCMT2O60294 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
LCMT2O60294 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC19.21■□□□□ 0.67
LCMT2O60294 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC19.21■□□□□ 0.67
LCMT2O60294 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC19.21■□□□□ 0.67
LCMT2O60294 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC19.21■□□□□ 0.67
LCMT2O60294 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC19.21■□□□□ 0.67
LCMT2O60294 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
LCMT2O60294 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
LCMT2O60294 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
LCMT2O60294 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
LCMT2O60294 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
LCMT2O60294 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC19.2■□□□□ 0.66
LCMT2O60294 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
LCMT2O60294 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
LCMT2O60294 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
LCMT2O60294 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC19.2■□□□□ 0.66
LCMT2O60294 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
LCMT2O60294 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
LCMT2O60294 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC19.2■□□□□ 0.66
LCMT2O60294 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
LCMT2O60294 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC19.2■□□□□ 0.66
LCMT2O60294 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC19.2■□□□□ 0.66
LCMT2O60294 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
LCMT2O60294 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC19.2■□□□□ 0.66
LCMT2O60294 AC023632.3-201ENST00000521633 145 ntBASIC19.2■□□□□ 0.66
LCMT2O60294 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC19.2■□□□□ 0.66
LCMT2O60294 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC19.2■□□□□ 0.66
LCMT2O60294 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC19.2■□□□□ 0.66
LCMT2O60294 HLA-B-256ENST00000639848 1089 ntBASIC19.2■□□□□ 0.66
LCMT2O60294 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC19.2■□□□□ 0.66
LCMT2O60294 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
LCMT2O60294 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
LCMT2O60294 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
LCMT2O60294 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
LCMT2O60294 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC19.2■□□□□ 0.66
LCMT2O60294 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC19.2■□□□□ 0.66
LCMT2O60294 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
LCMT2O60294 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
LCMT2O60294 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
LCMT2O60294 AC073130.3-201ENST00000624389 2278 ntBASIC19.2■□□□□ 0.66
LCMT2O60294 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
LCMT2O60294 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
LCMT2O60294 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
LCMT2O60294 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
LCMT2O60294 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC19.19■□□□□ 0.66
LCMT2O60294 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
LCMT2O60294 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
LCMT2O60294 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC19.19■□□□□ 0.66
LCMT2O60294 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
LCMT2O60294 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC19.19■□□□□ 0.66
LCMT2O60294 KRT18P6-201ENST00000555540 1265 ntBASIC19.19■□□□□ 0.66
LCMT2O60294 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
LCMT2O60294 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC19.19■□□□□ 0.66
LCMT2O60294 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
LCMT2O60294 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
LCMT2O60294 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
LCMT2O60294 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
LCMT2O60294 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
LCMT2O60294 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
LCMT2O60294 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
LCMT2O60294 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
LCMT2O60294 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
LCMT2O60294 KRT8P20-201ENST00000423953 1409 ntBASIC19.18■□□□□ 0.66
LCMT2O60294 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
LCMT2O60294 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC19.18■□□□□ 0.66
LCMT2O60294 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC19.18■□□□□ 0.66
LCMT2O60294 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC19.18■□□□□ 0.66
LCMT2O60294 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
LCMT2O60294 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC19.18■□□□□ 0.66
LCMT2O60294 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
LCMT2O60294 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC19.18■□□□□ 0.66
LCMT2O60294 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
LCMT2O60294 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
LCMT2O60294 AC060766.5-201ENST00000590539 871 ntBASIC19.18■□□□□ 0.66
LCMT2O60294 AL031963.3-201ENST00000606441 850 ntBASIC19.18■□□□□ 0.66
LCMT2O60294 INO80E-214ENST00000620599 515 ntTSL 2 BASIC19.18■□□□□ 0.66
LCMT2O60294 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
LCMT2O60294 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC19.18■□□□□ 0.66
LCMT2O60294 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC19.18■□□□□ 0.66
LCMT2O60294 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 59.1 ms