Protein–RNA interactions for Protein: O43868

SLC28A2, Sodium/nucleoside cotransporter 2, humanhuman

Predictions only

Length 658 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A2O43868 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC19.31■□□□□ 0.68
SLC28A2O43868 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC19.31■□□□□ 0.68
SLC28A2O43868 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC19.31■□□□□ 0.68
SLC28A2O43868 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC19.31■□□□□ 0.68
SLC28A2O43868 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC19.31■□□□□ 0.68
SLC28A2O43868 AL445228.2-201ENST00000605589 952 ntBASIC19.31■□□□□ 0.68
SLC28A2O43868 AC133561.5-201ENST00000635547 218 ntBASIC19.31■□□□□ 0.68
SLC28A2O43868 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SLC28A2O43868 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
SLC28A2O43868 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
SLC28A2O43868 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC19.31■□□□□ 0.68
SLC28A2O43868 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC19.31■□□□□ 0.68
SLC28A2O43868 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
SLC28A2O43868 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
SLC28A2O43868 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
SLC28A2O43868 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SLC28A2O43868 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
SLC28A2O43868 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SLC28A2O43868 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC19.3■□□□□ 0.68
SLC28A2O43868 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
SLC28A2O43868 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SLC28A2O43868 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
SLC28A2O43868 POU5F1P4-201ENST00000413175 1085 ntBASIC19.3■□□□□ 0.68
SLC28A2O43868 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC19.3■□□□□ 0.68
SLC28A2O43868 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC19.3■□□□□ 0.68
SLC28A2O43868 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
SLC28A2O43868 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
SLC28A2O43868 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SLC28A2O43868 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
SLC28A2O43868 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
SLC28A2O43868 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
SLC28A2O43868 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
SLC28A2O43868 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
SLC28A2O43868 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SLC28A2O43868 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC19.29■□□□□ 0.68
SLC28A2O43868 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SLC28A2O43868 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
SLC28A2O43868 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
SLC28A2O43868 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SLC28A2O43868 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
SLC28A2O43868 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
SLC28A2O43868 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
SLC28A2O43868 NAA20-201ENST00000310450 920 ntTSL 2 BASIC19.29■□□□□ 0.68
SLC28A2O43868 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC19.29■□□□□ 0.68
SLC28A2O43868 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC19.29■□□□□ 0.68
SLC28A2O43868 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC19.29■□□□□ 0.68
SLC28A2O43868 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC19.29■□□□□ 0.68
SLC28A2O43868 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC19.29■□□□□ 0.68
SLC28A2O43868 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC19.29■□□□□ 0.68
SLC28A2O43868 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
SLC28A2O43868 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
SLC28A2O43868 AC007225.1-201ENST00000566331 1836 ntBASIC19.29■□□□□ 0.68
SLC28A2O43868 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SLC28A2O43868 EXOC3-AS1-202ENST00000623673 1663 ntBASIC19.29■□□□□ 0.68
SLC28A2O43868 AC073314.1-201ENST00000568729 2216 ntBASIC19.29■□□□□ 0.68
SLC28A2O43868 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SLC28A2O43868 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
SLC28A2O43868 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SLC28A2O43868 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
SLC28A2O43868 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SLC28A2O43868 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC19.28■□□□□ 0.68
SLC28A2O43868 AP005212.1-201ENST00000581547 1997 ntBASIC19.28■□□□□ 0.68
SLC28A2O43868 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SLC28A2O43868 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SLC28A2O43868 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SLC28A2O43868 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SLC28A2O43868 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC19.28■□□□□ 0.68
SLC28A2O43868 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC19.28■□□□□ 0.68
SLC28A2O43868 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
SLC28A2O43868 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SLC28A2O43868 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
SLC28A2O43868 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC19.28■□□□□ 0.68
SLC28A2O43868 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC19.28■□□□□ 0.68
SLC28A2O43868 LSM12P1-201ENST00000411836 588 ntBASIC19.28■□□□□ 0.68
SLC28A2O43868 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SLC28A2O43868 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SLC28A2O43868 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC19.28■□□□□ 0.68
SLC28A2O43868 GATS-209ENST00000454084 1030 ntTSL 3 BASIC19.28■□□□□ 0.68
SLC28A2O43868 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC19.28■□□□□ 0.68
SLC28A2O43868 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC19.28■□□□□ 0.68
SLC28A2O43868 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SLC28A2O43868 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC19.28■□□□□ 0.68
SLC28A2O43868 AL121603.2-201ENST00000557373 2117 ntBASIC19.28■□□□□ 0.68
SLC28A2O43868 GABARAPL3-202ENST00000624044 1851 ntBASIC19.28■□□□□ 0.68
SLC28A2O43868 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SLC28A2O43868 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SLC28A2O43868 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC19.28■□□□□ 0.68
SLC28A2O43868 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC19.28■□□□□ 0.68
SLC28A2O43868 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SLC28A2O43868 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
SLC28A2O43868 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC19.27■□□□□ 0.68
SLC28A2O43868 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
SLC28A2O43868 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SLC28A2O43868 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.68
SLC28A2O43868 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
SLC28A2O43868 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
SLC28A2O43868 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC19.27■□□□□ 0.68
SLC28A2O43868 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SLC28A2O43868 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC19.27■□□□□ 0.68
SLC28A2O43868 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 20.2 ms